Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 305 a.a., putative amino-acid transporter subunit from Escherichia coli BL21

 Score =  337 bits (863), Expect = 3e-97
 Identities = 161/305 (52%), Positives = 208/305 (68%)

Query: 34  VNCGISTGLVGFASQDANGEWQGFDVAVCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSG 93
           + CGIS GL GF+  DA+G++ G DV +CR VAAAVFGD T V + P+T + RF  L SG
Sbjct: 1   MQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSG 60

Query: 94  EIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGFMVPKALGVSSATELDGATVCIQKGTT 153
           E+D+L+RNTTWT SRD  + + FTG+ YYDG GF+     G+ SA ELDGATVCIQ GT 
Sbjct: 61  EVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTD 120

Query: 154 TELNLADFFRANNISFEPVPISTASEAQQQYLAGACDVYTTDASGLAATRASFESPDEHV 213
           TELN+AD+F+ANN+ + PV    + E+ +   +G CD   +D S L A R    +P E +
Sbjct: 121 TELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWI 180

Query: 214 VLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALIAAEELGVTSANVAELAAGTDNPEINR 273
           VLPE+ISKEPLGP+VR GD+EW  IVRWTL A++ AEE+G+ S NV E AA    P++  
Sbjct: 181 VLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH 240

Query: 274 LLGTEGNLGEQLGLSADWAVNVIKAGGNYGEIFETHIGENTPIGLARGLNAQWTEGGLLY 333
           LLG EG+ G+ L L   WA N+IK  GNY EIFE ++G  +P+ + RG N  W  GG+ Y
Sbjct: 241 LLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY 300

Query: 334 APPFR 338
           APP R
Sbjct: 301 APPVR 305