Pairwise Alignments

Query, 318 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 315 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Pseudomonas putida KT2440

 Score =  326 bits (835), Expect = 5e-94
 Identities = 171/311 (54%), Positives = 218/311 (70%), Gaps = 4/311 (1%)

Query: 6   LTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHEIVHNKYVVDGLRAKGAVFVKEL 65
           + + LA PRGFCAGVDRAI+IV  ALE +G P+YVRHE+VHNK+VV+ LR +GA+FV+EL
Sbjct: 1   MQIKLANPRGFCAGVDRAIEIVNRALEVFGPPIYVRHEVVHNKFVVEDLRNRGAIFVEEL 60

Query: 66  DDCPDDRPVIFSAHGVPKAVPAEATRREMVYVDATCPLVSKVHIEAERHHAGGLQMVMIG 125
           D  PDD  VIFSAHGV +AV  EA  R +   DATCPLV+KVHIE  ++   G + ++IG
Sbjct: 61  DQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDGRECILIG 120

Query: 126 HAGHPETVGTMGQLP---DGEVILVETVADVATITPRDPDKLAFITQTTLSVDDTADIVA 182
           H GHPE  GTMGQ      G + LVE   DVA +  RDPD LAF+TQTTLS+DDT+ ++ 
Sbjct: 121 HEGHPEVEGTMGQYDASNGGAIYLVEDEEDVANLQVRDPDHLAFVTQTTLSMDDTSRVID 180

Query: 183 ALQARFPAIVGPHKEDICYATTNRQGAVKAMAPKADAMLVIGAPNSSNSKRLVEVGRSAG 242
           AL+ARFP I GP K+DICYAT NRQ AVK +A ++D +LV+G+PNSSNS RL E+    G
Sbjct: 181 ALRARFPNIGGPRKDDICYATQNRQDAVKQLAGESDVVLVVGSPNSSNSNRLRELAERMG 240

Query: 243 CAYAQLVQRAEDIDWRALEGISSIGITAGASAPEVLVNEVIEAFRTRFDLTVEQVETAQE 302
              A L+  AED+     +  + IGITAGASAPEVLV  VIE  +       E+++  +E
Sbjct: 241 TP-AYLIDGAEDLQRGWFDQAARIGITAGASAPEVLVRGVIEQLKAWGATGAEELDGREE 299

Query: 303 NVEFKVPRVLR 313
           N+ F +P+ LR
Sbjct: 300 NITFSMPKELR 310