Pairwise Alignments

Query, 318 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 316 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein from Escherichia coli BL21

 Score =  320 bits (819), Expect = 4e-92
 Identities = 162/310 (52%), Positives = 223/310 (71%), Gaps = 3/310 (0%)

Query: 6   LTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHEIVHNKYVVDGLRAKGAVFVKEL 65
           + + LA PRGFCAGVDRAI IVE AL  +GAP+YVRHE+VHN+YVVD LR +GA+F++++
Sbjct: 1   MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI 60

Query: 66  DDCPDDRPVIFSAHGVPKAVPAEATRREMVYVDATCPLVSKVHIEAERHHAGGLQMVMIG 125
            + PD   +IFSAHGV +AV  EA  R++   DATCPLV+KVH+E  R    G + ++IG
Sbjct: 61  SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG 120

Query: 126 HAGHPETVGTMGQL--PDGEVILVETVADVATITPRDPDKLAFITQTTLSVDDTADIVAA 183
           HAGHPE  GTMGQ   P+G + LVE+  DV  +T ++ +KL+F+TQTTLSVDDT+D++ A
Sbjct: 121 HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA 180

Query: 184 LQARFPAIVGPHKEDICYATTNRQGAVKAMAPKADAMLVIGAPNSSNSKRLVEVGRSAGC 243
           L+ RFP IVGP K+DICYATTNRQ AV+A+A +A+ +LV+G+ NSSNS RL E+ +  G 
Sbjct: 181 LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMG- 239

Query: 244 AYAQLVQRAEDIDWRALEGISSIGITAGASAPEVLVNEVIEAFRTRFDLTVEQVETAQEN 303
             A L+  A+DI    ++ +  +G+TAGASAP++LV  V+   +         +E  +EN
Sbjct: 240 KRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREEN 299

Query: 304 VEFKVPRVLR 313
           + F+VP+ LR
Sbjct: 300 IVFEVPKELR 309