Pairwise Alignments

Query, 318 a.a., hydroxymethylbutenyl pyrophosphate reductase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 348 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Agrobacterium fabrum C58

 Score =  390 bits (1003), Expect = e-113
 Identities = 194/316 (61%), Positives = 239/316 (75%), Gaps = 3/316 (0%)

Query: 1   MSLPPLTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHEIVHNKYVVDGLRAKGAV 60
           +S PPLT+ L  PRGFCAGVDRAI+IV +AL+ +GAPVYVRHEIVHN+YVV+GL AKGA+
Sbjct: 5   VSKPPLTIRLCGPRGFCAGVDRAIQIVVLALKAYGAPVYVRHEIVHNRYVVEGLEAKGAI 64

Query: 61  FVKELDDCPDD---RPVIFSAHGVPKAVPAEATRREMVYVDATCPLVSKVHIEAERHHAG 117
           FV+EL + P +   +PV+FSAHGVPK+VP +A  R + Y+DATCPLVSKVH +A RH   
Sbjct: 65  FVEELHEIPAEHREQPVVFSAHGVPKSVPEDAQARNLFYLDATCPLVSKVHKQAMRHQRL 124

Query: 118 GLQMVMIGHAGHPETVGTMGQLPDGEVILVETVADVATITPRDPDKLAFITQTTLSVDDT 177
           G  +V+IGHAGHPE +GTMGQLP+G V LVETV D     P D + L F+TQTTLSVDDT
Sbjct: 125 GRHVVLIGHAGHPEVIGTMGQLPEGTVSLVETVEDAGVYEPVDRENLGFVTQTTLSVDDT 184

Query: 178 ADIVAALQARFPAIVGPHKEDICYATTNRQGAVKAMAPKADAMLVIGAPNSSNSKRLVEV 237
           A ++A LQ RFPAI  P  + ICYATTNRQ AVK  AP  D  +V+GAPNSSNSKRLVEV
Sbjct: 185 AGVIARLQERFPAIQAPAADSICYATTNRQDAVKQAAPGCDLFIVVGAPNSSNSKRLVEV 244

Query: 238 GRSAGCAYAQLVQRAEDIDWRALEGISSIGITAGASAPEVLVNEVIEAFRTRFDLTVEQV 297
              AG  ++ LVQRA +IDW  +  I ++G++AGASAPEV+V+E+IEAF+ RFD T++  
Sbjct: 245 ALRAGAKHSVLVQRASEIDWNEIGDIRTVGLSAGASAPEVIVDEIIEAFKARFDTTLDLA 304

Query: 298 ETAQENVEFKVPRVLR 313
            T +E   F V R LR
Sbjct: 305 VTVEETEHFLVNRELR 320