Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 451 a.a., HlyD family secretion protein from Pseudomonas fluorescens GW456-L13

 Score =  156 bits (394), Expect = 1e-42
 Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 10/416 (2%)

Query: 20  IALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGDTVATG 79
           +A A+LV     W+  A +    +  G+       QV+Q+ +GG+V  I V EG  V  G
Sbjct: 44  LAAALLVSAL-VWAKFAVLQEVTMGEGKAIPSSKVQVIQNLEGGIVTEIFVREGQMVNKG 102

Query: 80  DLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATSPEVAD 139
           D L++LD T   ++    E   F L A+   L AE +G+   + +E    V A +P+VA+
Sbjct: 103 DTLLRLDDTRYLSNKGESEADRFALTAQVERLSAEAEGRPFKLSEE----VIAKAPQVAE 158

Query: 140 VMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIEQELADQQS 199
               +R L+E R   + +E   L+ +  Q   ++    ++Q   +  L L++QE+     
Sbjct: 159 ---DERSLYEQRQRRLASEQRTLSEQLRQKTQELAEFRSKQGQFSSSLALLQQEMNMSAP 215

Query: 200 LLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSRREEAIS 259
           L+  G      +L L+R    + GS+   T +    E    EI  +I +   + R EA  
Sbjct: 216 LVGTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKSKIDESEQTFRSEAAK 275

Query: 260 RLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAEPVLYIVPQ 319
            L + +   S++     A+ +R++R  + +P+ GI+  L V     V++P   ++ IVP 
Sbjct: 276 ELNEKRTDLSKITASSIAIDDRVTRTTVVSPVHGIIKVLKVNTIGGVVQPGSDMVEIVPL 335

Query: 320 DRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFVDEATGASF 379
           +  L+I ++V P +V  ++ GQ+  ++FSA+D  +   L  K+  +  D   D+  G SF
Sbjct: 336 EDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELIGADTITDD-KGNSF 394

Query: 380 YRVETAPQEGEM-EKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAFRE 434
           Y ++    +  +   ++ L +IPGM     I T ++T ++Y +KP+      A RE
Sbjct: 395 YLIQVRTDKNHLGGDVKPLLIIPGMVATVDIITGEKTVLDYLLKPVLKARTEAMRE 450