Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 457 a.a., HlyD family type I secretion periplasmic adaptor subunit from Variovorax sp. OAS795

 Score =  192 bits (487), Expect = 2e-53
 Identities = 128/416 (30%), Positives = 207/416 (49%), Gaps = 15/416 (3%)

Query: 17  IGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGDTV 76
           IG  ALAI  GGF  W+  A +   + + GQ+ +D  R+ VQH  GG+++ + V EGD V
Sbjct: 40  IGAWALAIGFGGFLVWAAFAPLDEGVPSQGQVAIDTKRKAVQHQIGGILKEVRVGEGDQV 99

Query: 77  ATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATSPE 136
             G LL +LD    +     V  +     A +  L+AE+ GQ  + F  +L   +A+ P 
Sbjct: 100 QEGQLLFKLDDAASRASFETVRQRYLGFRAIQGRLLAEQGGQNSIDFHPDLQ-AAASDPL 158

Query: 137 VADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALT---QQLDLIEQE 193
           +   M  Q +L  +R  ++  + + +      I  Q E  +A  + L    QQL L+ +E
Sbjct: 159 IRQHMFNQEQLLRSRRAALRADLQSIEEN---IQGQQELSQAYSSMLVSRRQQLSLLHEE 215

Query: 194 LADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSR 253
           L   + ++  G A  +R L ++R+ A    S+ EL  +     GR      E+ + + +R
Sbjct: 216 LGQTRKMVGEGFAPRNRQLEMERQVAESNTSIAELIGNM----GRARRSIAELRQRAIAR 271

Query: 254 REEAISRLRDTQAQESELK----QQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRP 309
           ++E    +   QA+ S       ++  ALR+ L R +IR+P  G V  L       V+ P
Sbjct: 272 QQEYHKEVETQQAEVSREVLGDYEKFVALRDELGRTEIRSPASGQVVGLVAQTVGGVVAP 331

Query: 310 AEPVLYIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDA 369
            + ++ +VP + PL++ +RV P  +D V  G  V++RFS F       ++GK+ SVS D 
Sbjct: 332 GQKLMDVVPANEPLLLETRVPPHLIDRVRAGIPVDVRFSTFAHSPQLVVQGKLASVSGDL 391

Query: 370 FVDEATGASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLS 425
            VD  T AS+Y    A     ++KL    L PGMPVE   +T +R+ + Y + PL+
Sbjct: 392 LVDPQTNASYYLARVAVTPEGLQKLGKRSLQPGMPVEVVFKTGERSLLVYLLHPLT 447