Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 440 a.a., Type I secretion membrane fusion protein, HlyD from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  211 bits (537), Expect = 4e-59
 Identities = 126/418 (30%), Positives = 213/418 (50%), Gaps = 4/418 (0%)

Query: 17  IGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGDTV 76
           IG   + +  G FG+W+ +A +  A+   G + V   R+ VQH +GG+V+ + V +GDTV
Sbjct: 26  IGVTIVLVTFGLFGTWAALAPLDNAVYGSGLVMVQSYRKTVQHLEGGIVKELLVRDGDTV 85

Query: 77  ATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATSPE 136
             GD LI LD + L++       QL    AR A L AERD    +     L +    S  
Sbjct: 86  HKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSI---PPLTITGTDSVR 142

Query: 137 VADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIEQELAD 196
             + + G++++F  R  S  TE      R  Q+  QI G+                E+ +
Sbjct: 143 AKEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMIRTKVSLEKSYSSEITE 202

Query: 197 QQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSRREE 256
            + LL +G     R+L  +R+   L   V +  ++  + + + +E +++I++L+ +   +
Sbjct: 203 LKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISETELQIIQLNKNFSSD 262

Query: 257 AISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAEPVLYI 316
               L D QA+  +L++   AL++RLSR+ IRAP  G+V D+ V     V+    P+L I
Sbjct: 263 VAKELSDVQAKVFDLQETANALQDRLSRVVIRAPEDGMVLDMKVHTVGGVVSAGTPLLDI 322

Query: 317 VPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFVDEATG 376
           VP+   L++ + V   ++D + +G+  ++ FSAF+   TP ++G+V  +S D   D+A G
Sbjct: 323 VPESSELVVEAHVAITDIDRISIGKLTDVHFSAFNSATTPVIEGEVTRISADRLKDDA-G 381

Query: 377 ASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAFRE 434
             +Y V     E  M++L    L PGMP E  I   +RT ++Y +KP S+ F ++  E
Sbjct: 382 EPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINAGERTMLQYLLKPASNVFIKSMIE 439