Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  313 bits (803), Expect = 5e-90
 Identities = 171/423 (40%), Positives = 255/423 (60%), Gaps = 1/423 (0%)

Query: 12  RRQLLIGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVD 71
           R+ LL G  A A L+ G G W+   N+AGA++A G + VD   + VQHP GGVV  I V+
Sbjct: 15  RKHLLAGLAAGAALLAGVGGWAATTNLAGAVVASGHLVVDSYTKKVQHPKGGVVGEILVN 74

Query: 72  EGDTVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVS 131
           EG+ V  GD++++LD T  + +L+IV  +L EL AR A L AERD   E+IF + L+   
Sbjct: 75  EGERVKAGDVVMRLDATQTRANLAIVTKRLDELGARMARLEAERDDLAELIFPQALI-AR 133

Query: 132 ATSPEVADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIE 191
              P+VA  M  + +LFE R +  E    QL  R  Q  ++IEG++AQ+ A    L ++E
Sbjct: 134 RDDPDVASAMRSETKLFEFRKSYREGRKAQLAERITQFEHEIEGLKAQEVAYDNGLAVLE 193

Query: 192 QELADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLST 251
            E+  Q+SL ++G+    R+ SLQ + A   G  GE  A +A+  GR TE  ++IL++  
Sbjct: 194 AEITSQKSLREQGVVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRITETKLQILQIDQ 253

Query: 252 SRREEAISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAE 311
             R E    LR+ QAQ  E  +++ A  + L R+DI AP  G+V++++V     V+ PA+
Sbjct: 254 ELRTEVGRELREIQAQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAVHTVGGVVTPAD 313

Query: 312 PVLYIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFV 371
           P++ IVP    L +  ++ P ++D++ VGQ+  LR +AF+QR+TPEL+G V  ++ D   
Sbjct: 314 PIMLIVPDGDELALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGHVSRIAADITT 373

Query: 372 DEATGASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRA 431
           D+ TG S+Y    +    E EKL    L+PGMP EAFI+T++RT + Y  KPL+D  +RA
Sbjct: 374 DQRTGLSYYLARISVPVSEREKLNNAPLVPGMPAEAFIQTSERTALSYIAKPLTDQISRA 433

Query: 432 FRE 434
           FRE
Sbjct: 434 FRE 436