Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 452 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  201 bits (511), Expect = 4e-56
 Identities = 123/429 (28%), Positives = 222/429 (51%), Gaps = 16/429 (3%)

Query: 16  LIGGIALAILV---GGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDE 72
           L   I LA+L+   GGFG W+  A ++ AIIA G      N +VVQH +GG+++ + V E
Sbjct: 29  LHSSIGLAVLLASFGGFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGGIIKEMMVSE 88

Query: 73  GDTVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAER---DGQEEVIFD-EELL 128
           GDTV  GD+L+ LD T      ++   ++F+L   R   +  R   + Q E  F   +++
Sbjct: 89  GDTVKVGDVLLTLDKTT-----ALANERMFQLRRLRLETIVTRLRAEAQGEKSFKVPDIV 143

Query: 129 LVSATSPEVADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLD 188
           +  A+ P++  ++  Q  +F ++   ++ +   + +    +  +  G + Q+ +  +QL 
Sbjct: 144 MKEASDPDIKSIIQSQNVVFHSKLVKLDEQLNLINKNIKSLEFRFAGYDGQKQSFDRQLA 203

Query: 189 LIEQELADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILK 248
           L+ QE   ++ L   G+ + + +L+L+R  A  +G +  LT    + E    +   E + 
Sbjct: 204 LLTQERDSKERLAKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSEAEIAKFKQEAVI 263

Query: 249 LSTSRREEAISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIR 308
              + ++ A+  L   ++    +++Q +   E L R  IR+P+ G V          VI 
Sbjct: 264 AVNANKQAALDALEIAESDLDSVREQVRGAAEVLERTVIRSPVNGTVIRAYYHTPGGVIT 323

Query: 309 PAEPVLYIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPD 368
             +P++ I+P   PLI+ ++V   ++D+++ GQ   +R SA ++R TP L GKV  VS D
Sbjct: 324 TGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIRLSALNRRTTPVLNGKVFYVSAD 383

Query: 369 AFVDEATG---ASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLS 425
           + ++E  G      Y V     + E+ K+     +PGMP +  I+T++RT  EY  KP++
Sbjct: 384 S-IEENAGLQVKDVYIVRVQISDEEIAKVHNFHPVPGMPADVLIQTSERTFFEYLTKPIA 442

Query: 426 DYFNRAFRE 434
           D  +RAF+E
Sbjct: 443 DSMSRAFKE 451