Pairwise Alignments

Query, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  285 bits (729), Expect = 2e-81
 Identities = 147/413 (35%), Positives = 246/413 (59%), Gaps = 2/413 (0%)

Query: 20  IALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGDTVATG 79
           + L +LVG  G W+  A +AGA++A G++ V+ N + +QH  GG+V  I V EGD VA G
Sbjct: 24  LGLGLLVG-MGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVAAG 82

Query: 80  DLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATSPEVAD 139
            +L++L  T++Q +LSI+E  L +L +RRA L AE   +      E+L  +++ S     
Sbjct: 83  QILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTS-SKSAKT 141

Query: 140 VMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIEQELADQQS 199
            +D ++ LF +R  ++    +QL  R+ Q+ ++  G++ Q  A   +L +++++++    
Sbjct: 142 FIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDE 201

Query: 200 LLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSRREEAIS 259
           LL +GL    R+  L+R+ + L G  G+  A++A+  G+ +E+D+++L+L   R+ E   
Sbjct: 202 LLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKLSELDLQLLQLDEDRKSEVTK 261

Query: 260 RLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAEPVLYIVPQ 319
            L   +A  +E +++  A R++L RLDIR+P+ G +Y LSV     VI+P E ++ +VP 
Sbjct: 262 DLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVVPD 321

Query: 320 DRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFVDEATGASF 379
              L I + + P ++D++YVGQ V +RF+AF+Q  TP+L  +V  V+PD   D  TG S+
Sbjct: 322 KDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDLQTDSRTGTSY 381

Query: 380 YRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAF 432
           Y +   P +  M  L G  L PGMP E FI+T++R+ + YFVKP  D   + F
Sbjct: 382 YVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTF 434