Pairwise Alignments

Query, 605 a.a., GTP-binding protein TypA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 607 a.a., GTP-binding protein (NCBI) from Escherichia coli BW25113

 Score =  618 bits (1594), Expect = 0.0
 Identities = 324/603 (53%), Positives = 425/603 (70%), Gaps = 5/603 (0%)

Query: 3   LRNIAIIAHVDHGKTTLVDELLKQSGTYRDNQATTERAMDSNDLERERGITILAKATSVE 62
           LRNIAIIAHVDHGKTTLVD+LL+QSGT+     T ER MDSNDLE+ERGITILAK T+++
Sbjct: 5   LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64

Query: 63  WKGTRINIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPI 122
           W   RINIVDTPGHADFGGEVER++SMVD V+L+VDA +GPMPQT+FVT KA A GL+PI
Sbjct: 65  WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124

Query: 123 VVLNKVDKPDAEPDRALDECFDLFANLDADDDQLDFPHLYASGRSGWADAELDGPRKDLA 182
           VV+NKVD+P A PD  +D+ FDLF NLDA D+QLDFP +YAS  +G A  + +   +D+ 
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184

Query: 183 ALFDLIVHHVPKPRQIAHLDEDFRMLATTLSADPFVGRILTGRVESGTLKVGATVQALSR 242
            L+  IV HVP P     LD  F+M  + L  + +VG I  GR++ G +K    V  +  
Sbjct: 185 PLYQAIVDHVPAPD--VDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS 242

Query: 243 IGQKIEQFRVTKIRAFRGLGHADIEEAQAGDIVSIAGMSKATVADTICALAVDTPLDAQP 302
            G K    +V K+    GL   + + A+AGDIV+I G+ +  ++DT+C       L A  
Sbjct: 243 EG-KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALS 301

Query: 303 IDPPTITVTFGINDSPLAGRDGKKVQSRVIRDRLMKEAESNVAIKIADTPGGEAFEVSGR 362
           +D PT+++ F +N SP  G++GK V SR I DRL KE   NVA+++ +T   +AF VSGR
Sbjct: 302 VDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGR 361

Query: 363 GELQMGVLIENMRREGFELSISRPQVIMREVDGVKMEPIEEATIDVDDEYSGTVIEKLTG 422
           GEL + VLIENMRREGFEL++SRP+VI RE+DG K EP E  T+DV++++ G+V++ L G
Sbjct: 362 GELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQAL-G 420

Query: 423 ARKGDLVEMKPAGAGKTRIVAHVPSRGLIGYHGEFLTDTRGTGVLNRVFHDWAPYK-GPI 481
            RKGDL  M P G G+ R+   +PSRGLIG+  EF+T T GTG+L   F  +   + G +
Sbjct: 421 ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV 480

Query: 482 PGRRAGVLISMENGTSVAYALWNLEERGRMFIGAQEAVYTGMIIGEHSRENDLEVNPLKG 541
             R+ GVLIS   G +VA+AL+ L++RG++F+G    VY G IIG HSR NDL VN L G
Sbjct: 481 GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG 540

Query: 542 KKLTNVRASGTDDAVRLTTPITLSLEEAIAYIDDDELVEVTPNAIRLRKRYLDPHERKRQ 601
           KKLTN+RASGTD+AV L  PI ++LE+A+ +IDDDELVEVTP +IR+RKR+L  ++R+R 
Sbjct: 541 KKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA 600

Query: 602 ARA 604
            RA
Sbjct: 601 NRA 603