Pairwise Alignments

Query, 379 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 383 a.a., succinyl-diaminopimelate desuccinylase from Pseudomonas simiae WCS417

 Score =  246 bits (627), Expect = 1e-69
 Identities = 151/377 (40%), Positives = 210/377 (55%), Gaps = 8/377 (2%)

Query: 1   MTDPVALTADLIRCPSVTPEEGGALSLLEARLSAAGFACTRVDRNGIANLFARWGEKGHA 60
           ++  + L  DLIR PSVTP +     L+  RL  AGFA   +    + N +A  G K   
Sbjct: 7   LSPTLQLAIDLIRRPSVTPIDADCQKLMMQRLGDAGFALEPMRIEDVDNFWATHG-KHDG 65

Query: 61  RSFGFNGHTDVVPVGARADWRFDPFGAQVEGDWMY-GRGAVDMKSAVAAFAAAAMDFVAD 119
               F GHTDVVP G    W+ DPF A ++ + M  GRGA DMK ++AA   AA  FV D
Sbjct: 66  PVLCFAGHTDVVPTGPVQAWQNDPFDALIDENGMLCGRGAADMKGSLAAMLVAAERFVTD 125

Query: 120 TPPD-GAVILAITGDEEGDAKDGTVALLDWMAAQGEAMDVCLVGEPTCPDEMGEMMKIGR 178
            P   G+V   IT DEEG A  GT A+++ +AA+ E +D C+VGEP+    +G+++K GR
Sbjct: 126 YPDHKGSVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDVVKNGR 185

Query: 179 RGSMTFFFEALGVQGHSAYPHRAKNPLPALAKLVDRLAGLELDTGTDHFDPSTLAVTTFD 238
           RGS+       G+QGH AYPH AKNP+   A  +  LA    D G   F P++  ++  +
Sbjct: 186 RGSLGATLTVRGIQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQISNLN 245

Query: 239 TGNPANNVIPAACRATVNIRFNDAHSSESLTAMVRGIAAEVAAETGIEITDRVSVSGESF 298
           +G  A NVIP   +A  N RF+   + E L   V    AE+  + G++     ++SG  F
Sbjct: 246 SGTGATNVIPGDLKAVFNFRFSTESTVEGLQQRV----AEILDKHGLDWHVEWALSGLPF 301

Query: 299 ITPPGRLSDLVAAAVETETGRVPVLSTSGGTSDARFVQH-HCPVVEFGLVGKSMHQVDER 357
           +T PG L D V+A+++  TGR    STSGGTSD RF+      VVE G V  ++HQV+ER
Sbjct: 302 LTEPGALLDAVSASIKAITGRETQASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNER 361

Query: 358 VAIAQIPQLKAIYTRIL 374
           +  + +  L  IY + L
Sbjct: 362 ILASDLDVLTEIYYQTL 378