Pairwise Alignments

Query, 581 a.a., site-specific tyrosine recombinase XerC from Dickeya dianthicola ME23

Subject, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (359), Expect = 1e-38
 Identities = 97/290 (33%), Positives = 160/290 (55%), Gaps = 13/290 (4%)

Query: 185 ERNWSETTLKTQTHHQYRFILWAAERGLHYGRD-ITLPILEHYQRHLYQYRKPNGEPLST 243
           ER  +E T+ +  +   + + W A+    Y  D I+   L+ YQ  L +    N +P S 
Sbjct: 22  ERGLAENTVASYRNDLSKLLEWMAQN--QYRLDFISFAGLQEYQSWLSEQ---NYKPTSK 76

Query: 244 RTQRSQLGPLVVWFGWMTRHHLLLADPASGLVLPRLEKRLPRHILSVADVEQVLALPDLT 303
               S +  L   F ++ R  +   DP++ LV P+L  RLP+  LS A VE +L+ PD  
Sbjct: 77  ARMLSAIRRL---FQYLHREKVRADDPSALLVSPKLPTRLPKD-LSEAQVEALLSAPDPQ 132

Query: 304 TLQGIRDRALMELLWSTGIRRGEVAVLEVYSVDASRHIVTIVQGKGKKDRVIPVGQRALR 363
           +   +RD+A++ELL++TG+R  E+  L + ++   + +V ++ GKG K+R++P+G+ A+ 
Sbjct: 133 SPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVM-GKGGKERLVPMGENAIE 191

Query: 364 WLAYYLQAVRPQLLVNPHCPALFVALDGIEGLTPNGITNLVSHYIKASGI-AKWGSCHLF 422
           W+  +LQ  R  LL       +F +  G + +T     + + HY   +GI  +  S H+ 
Sbjct: 192 WIETFLQQGRSLLLGEQTSDIVFPSSRG-QQMTRQTFWHRIKHYAVIAGIDVEKLSPHVL 250

Query: 423 RHAMATQMLENGADLRWIQAMLGHASVESTQIYTQVSIRALQAVHASTHP 472
           RHA AT +L  GADLR +Q +LGH+ + +TQIYT V+   L+ +H   HP
Sbjct: 251 RHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHP 300