Pairwise Alignments

Query, 581 a.a., site-specific tyrosine recombinase XerC from Dickeya dianthicola ME23

Subject, 321 a.a., integrase/recombinase XerD (RefSeq) from Shewanella amazonensis SB2B

 Score =  119 bits (299), Expect = 1e-31
 Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 7/215 (3%)

Query: 262 RHHL----LLADPASGLVLPRLEKRLPRHILSVADVEQVLALPDLTTLQGIRDRALMELL 317
           RH L    L  DP + +  P+L K LP   LS A VEQ+LA P        RD+A++ELL
Sbjct: 108 RHQLVSGTLSEDPTALIESPKLPKSLPGS-LSEAQVEQLLAEPSSDDPVECRDKAMLELL 166

Query: 318 WSTGIRRGEVAVLEVYSVDASRHIVTIVQGKGKKDRVIPVGQRALRWLAYYLQAVRPQLL 377
           ++TG+R  E+  L +  +   + +V I+ GKG K+R++P+G+ A   L  +L   R  LL
Sbjct: 167 YATGLRVSELVGLGMSELGLRQGLVRII-GKGGKERLVPMGEVAQDALEQFLAGPRQMLL 225

Query: 378 VNPHCPALFVALDGIEGLTPNGITNLVSHYIKASGIAKWGSCHLFRHAMATQMLENGADL 437
                  +F +  G + +T     + +  Y   +GI+   S H  RHA AT +L +GADL
Sbjct: 226 KQGATEVVFPSNRG-QQMTRQTFWHRIKLYALRAGISTELSPHTLRHAFATHLLNHGADL 284

Query: 438 RWIQAMLGHASVESTQIYTQVSIRALQAVHASTHP 472
           R +Q +LGH+S+ +TQIYT V+   L  +H   HP
Sbjct: 285 RVVQLLLGHSSLSTTQIYTHVARTRLADLHEKHHP 319