Pairwise Alignments

Query, 312 a.a., substrate-binding domain-containing protein from Dickeya dianthicola ME23

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  205 bits (522), Expect = 1e-57
 Identities = 121/335 (36%), Positives = 192/335 (57%), Gaps = 25/335 (7%)

Query: 1   MATMKDVARLAGVSTSTVSHVINNNRYVSDAIRYRVMKAVEQLNYAPSALARSLKINQTR 60
           MATMKDVA+LAGVST+TVS  + N   VS + R RV +AV +  Y+P++LAR+L+ N+++
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 61  TIGMLLTASSNPFYAEVVRGVERCCYERGYSLILCNTEGDHHRLSRSLETLLQKRVDGLL 120
           TI  ++    +P+++E++RG+E    E GY ++L ++     R +  +  +  K+ DG+L
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 121 LMCTESHMPSPDIIRRYPSIPVVMM--DWAPFEGSSDVIKDNSLQGGEMAT------HHL 172
           L+ T+  +P         ++P ++M  ++AP      V  DN     E         H  
Sbjct: 121 LLGTD--LPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKR 178

Query: 173 IS---------------QGYRKAMHQAGLSILPGYEVIGDFEFETGFRAMQQLLALPERP 217
           I+               QGY++A+ +AG+++ P Y   GDF FE G +A++QLLALPE+P
Sbjct: 179 IAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQP 238

Query: 218 DAVFTSNDAMAVGVYRALYEAGLSIPDDMAVVGYDDIELARYLSPPLTTIHQPKDELGEL 277
            A+F  ND MA+G  +     GL +P D++VVG+DDI+ A+Y  PPLTTI QP+ E+G  
Sbjct: 239 TAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQ 298

Query: 278 AIDTLFHRLEHPDAEHNVLVLTPELIIRDSVGKRS 312
           A+  +   L   D      +L  +L++R+S    S
Sbjct: 299 AMLMMLELLRGHDVRAGSRLLETKLVVRESAAPPS 333