Pairwise Alignments

Query, 285 a.a., RNA polymerase sigma factor RpoH from Dickeya dianthicola ME23

Subject, 528 a.a., RNA polymerase sigma factor SigA (sigma-A) from Mycobacterium tuberculosis H37Rv

 Score =  102 bits (253), Expect = 2e-26
 Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 49/302 (16%)

Query: 15  SLEGYIRAANAYPMLTAEEERALAERLHYH-----------------------------G 45
           S+  Y++      +L AEEE  LA+R+                                 
Sbjct: 227 SVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTELSERGEKLPAAQRRDMMWICR 286

Query: 46  DLDAAKQLIL-SHLRFVIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSF 104
           D D AK  +L ++LR V+ +A+ Y+G G+   DLIQEGN+GL++AV +F+   G +  ++
Sbjct: 287 DGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTY 346

Query: 105 AVHWIKAEIHEYVLRNWRIVKVATTKAQ--RKLFFNLRKTKQRLGWFNQDEVELVARELG 162
           A  WI+  I   +    R +++     +   KL    R+  Q LG   +   E +A+E+ 
Sbjct: 347 ATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLG--REPTPEELAKEMD 404

Query: 163 VTSKDVREMESRMAAQDMTFDPS--PEDDAQPGQPMAPMLYLQDKSSDFA-DGIEEDNWE 219
           +T + V E++ + A + ++ D +   E D+Q G       +++D  +  A D +      
Sbjct: 405 ITPEKVLEIQ-QYAREPISLDQTIGDEGDSQLGD------FIEDSEAVVAVDAVS----F 453

Query: 220 THAADKLTYALEGLDERSQHIIRARW-LDDDNKSTLQELADHYGVSAERIRQLEKNAMKK 278
           T   D+L   L+ L ER   ++R R+ L D    TL E+   YGV+ ERIRQ+E   M K
Sbjct: 454 TLLQDQLQSVLDTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSK 513

Query: 279 LR 280
           LR
Sbjct: 514 LR 515