Pairwise Alignments

Query, 720 a.a., DNA helicase II from Dickeya dianthicola ME23

Subject, 729 a.a., Superfamily I DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score =  883 bits (2281), Expect = 0.0
 Identities = 452/726 (62%), Positives = 562/726 (77%), Gaps = 7/726 (0%)

Query: 2   DVSDLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAVT 61
           D+S LL+SLND QR AVAA     LVLAGAGSGKTRVLVHRIAWL  VE  S +SI++VT
Sbjct: 4   DLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLNQVERASLHSILSVT 63

Query: 62  FTNKAAAEMRHRIDQLLGTGQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQLR 121
           FTNKAAAEMR RI+QLL     GMW+GTFHGLAHRLLRAH  +A L Q+FQILDS+DQ R
Sbjct: 64  FTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWQEAKLAQNFQILDSDDQQR 123

Query: 122 LLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEAC 181
           L+KR+I+ L LDE++WP RQA W+IN +KDEGLRP++I   G+    T L+IY+AY+EAC
Sbjct: 124 LVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPRNIQPGGDLFLATQLKIYEAYEEAC 183

Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDGA 241
            RAG++DF+ELLLRA +LW + P +L+HY+ RF ++LVDEFQDTN +QYAW+RLLA  G 
Sbjct: 184 ARAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAKGGE 243

Query: 242 KVMIVGDDDQSIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHNG 301
            +M+VGDDDQSIYGWRGA++EN+  F +DF D  TIRLEQNYRSTA IL AANALIA+N 
Sbjct: 244 SLMVVGDDDQSIYGWRGARIENLHQFSQDFPDAETIRLEQNYRSTACILKAANALIANNQ 303

Query: 302 DRLGKNLWTDGIDGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSR 361
            RLGK LWT G +GEPISLY AFNE DEAR+VV  I+     G + SE AILYRSNAQSR
Sbjct: 304 GRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNAQSR 363

Query: 362 VLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGDR 421
           VLEEALL++ +PYRIYGG RFFER EIK+A++YLRL+  R++DAA ERV+N P RGIG++
Sbjct: 364 VLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARGIGEK 423

Query: 422 TLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQT 481
           T++ +RQ AR++ L++W A    +  K ++GRAA+AL  F+ELVD LA     + LH   
Sbjct: 424 TVECLRQLAREQGLSMWAALHQAVGTKAVSGRAASALNGFVELVDTLALKVEGMQLHNMA 483

Query: 482 DRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQF-SYQDEDQDL-LPLQAFLSHAA 539
             VI  SGL + +  EKGEK QARVENLEELV+A R F SY +ED D+  PL AFL HA+
Sbjct: 484 QLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYSEEDDDIQSPLAAFLDHAS 543

Query: 540 LEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLA 599
           LEAGE QA  ++D+VQLMTLHSAKGLEFP VF+VGMEEG+FP +MSL+E GRLEEERRLA
Sbjct: 544 LEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRLA 603

Query: 600 YVGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPTECVEEVRLRASVSRPVNHQRL 659
           YVG+TRAMQ+L +TYAE+RRLYG ETY++ SRF+ E+P   V+EVRL  +V+R  N + +
Sbjct: 604 YVGITRAMQQLVITYAETRRLYGSETYNKISRFVREIPPALVQEVRLSNTVTRSFNGKSM 663

Query: 660 -GTPISQS----DTGYKLGQRVRHAKFGEGTIVNVEGSGEHCRIQVAFAGQGIKWLVAAY 714
            G+ +       +T + LGQRVRH+ FGEGTI+N EGSG   R+QV F  +G KWL+ +Y
Sbjct: 664 SGSSLFDGAGVPETPFSLGQRVRHSLFGEGTILNFEGSGAQARVQVNFEDEGSKWLMLSY 723

Query: 715 ARLDTV 720
           A+L+ +
Sbjct: 724 AKLEAL 729