Pairwise Alignments

Query, 720 a.a., DNA helicase II from Dickeya dianthicola ME23

Subject, 857 a.a., DNA helicase II protein from Sinorhizobium meliloti 1021

 Score =  462 bits (1188), Expect = e-134
 Identities = 280/695 (40%), Positives = 391/695 (56%), Gaps = 70/695 (10%)

Query: 5   DLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAVTFTN 64
           D +  LN +QR+AV A    +LVLAGAG+GKTRVL  RIA +L+     P  I+AVTFTN
Sbjct: 42  DYVSGLNPEQREAVEALEGPVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTN 101

Query: 65  KAAAEMRHRIDQLLGTGQGGM-WIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQLRLL 123
           KAA EM+ RI  L+G    GM W+GTFH +  +LLR H    GL  DF ILD++D +RL+
Sbjct: 102 KAAREMKERIGVLVGHAVEGMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLI 161

Query: 124 KRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHID-----SYGNPVEQTWLRIYQAYQ 178
           K+LI+A  LD+K+WP +Q    I+  K++GL P  I      ++ N   +    +Y AYQ
Sbjct: 162 KQLIQAEGLDDKRWPAKQFAGMIDTWKNKGLDPSQIPEGDARAFANGKGR---ELYAAYQ 218

Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLA- 237
                    DF +LLL    ++   P +L+ Y  +F  ILVDE+QDTN  QY W+RLLA 
Sbjct: 219 NRLLTLNACDFGDLLLHPIRMFRANPDVLKEYHAKFRYILVDEYQDTNTAQYMWLRLLAQ 278

Query: 238 -------------------GDGAK---------------------------VMIVGDDDQ 251
                               DG K                           +  VGDDDQ
Sbjct: 279 QTQASRNRPSSGLPATFSPSDGEKGQAARSQSPLSPSERGEGRGEGQPTVNICCVGDDDQ 338

Query: 252 SIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHNGDRLGKNLWTD 311
           SIYGWRGA+V+NI  F +DF     I+LE+NYRST +IL AA  LIAHN  RLGK L+T+
Sbjct: 339 SIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLFTE 398

Query: 312 GI--DGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSRVLEEALLQ 369
               D E + ++ A++  +EAR +   I+  Q     L++ +IL R++ Q R  E+  + 
Sbjct: 399 RTNPDDEKVHVHAAWDSEEEARAIGEEIEQLQRKKHNLNDISILVRASFQMREFEDRFVT 458

Query: 370 QSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGDRTLDVVRQT 429
             L YR+ GG RF+ER EI+DA++Y RL+    DD AFER+VNTP RG+G+ T+  +   
Sbjct: 459 LGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGETTVRTLHDY 518

Query: 430 ARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQTDRVIRDSG 489
           AR R + +  A   +++   L  +A   L   +       +     P     +R++ +SG
Sbjct: 519 ARARDIPMLAAASDIVETDELKPKARKGLFDVVADFRRWQTLLETTPHTELAERILDESG 578

Query: 490 LWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAALEAGEGQADA 549
             +M++ +K  +   R+ENL+EL+ +   F           ++ FL H AL   + + + 
Sbjct: 579 YTAMWQADKSAEAPGRLENLKELIRSMEAFE---------SMRGFLEHVAL-VMDAEQNE 628

Query: 550 YQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAM 607
             DAV +MTLHSAKGLEF  VF+ G EEG+FP Q +LDEGGR  LEEERRLAYVG+TRA 
Sbjct: 629 NMDAVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRAGLEEERRLAYVGITRAK 688

Query: 608 QKLTLTYAESRRLYGKETYHRPSRFIGELPTECVE 642
           ++  + +  +RR++G      PSRF+ ELP   VE
Sbjct: 689 RRCHIWFVSNRRIHGLWQSTLPSRFLDELPIAHVE 723