Pairwise Alignments

Query, 720 a.a., DNA helicase II from Dickeya dianthicola ME23

Subject, 768 a.a., UvrD/REP helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  499 bits (1286), Expect = e-145
 Identities = 308/760 (40%), Positives = 428/760 (56%), Gaps = 71/760 (9%)

Query: 7   LDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAVTFTNKA 66
           L  LN +QR AV      +LVL+GAG+GKTRVL  R+A +L      P+ ++AVTFTN+A
Sbjct: 25  LAGLNPEQRAAVTTTDGPVLVLSGAGTGKTRVLTARLAQILATRPVRPWQVLAVTFTNRA 84

Query: 67  AAEMRHRIDQLLGTGQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQLRLLKRL 126
           A EMR R   ++G     +W+GTFH L  R+LR H    GL   F ILD++DQLRLLK++
Sbjct: 85  AREMRERAGAMIGPMAEQVWLGTFHALGVRMLRRHGDLVGLRSGFTILDADDQLRLLKQI 144

Query: 127 IKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLR---IYQAYQEACDR 183
           ++A  +D K+W P+  M  I   KD+GL P+ + +     E    R   +Y+ YQ+    
Sbjct: 145 LEAEGIDTKKWTPQAGMGLIQRWKDKGLLPEAVPAGDGGREYAGGRAVDLYKQYQQRLAV 204

Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDGAKV 243
               DF +LLL    ++   P +L  Y   F+ ILVDE+QDTN  QY W+RLLA     +
Sbjct: 205 VNAADFGDLLLHCLTIFTKHPDVLADYSKMFHYILVDEYQDTNVAQYLWLRLLARGHGNI 264

Query: 244 MIVGDDDQSIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHNGDR 303
             VGDDDQSIY WRGA+V NI  F  DF   T +RLE+NYRST  IL AA+ LI HN  R
Sbjct: 265 CCVGDDDQSIYSWRGAEVGNILRFEADFPGATVVRLERNYRSTPTILAAASGLIRHNKGR 324

Query: 304 LGKNLWTDGID--GEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSR 361
           LGK+L     D  G+ + +   ++  +EAR VV  I+  Q AG  L+  A+L R+  Q+R
Sbjct: 325 LGKDLRAGEGDEAGDAVIVRGLWDGEEEARRVVDDIETRQRAGDRLNGMAVLVRAGFQTR 384

Query: 362 VLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGDR 421
             EE L+   +PYR+ GG RF+ERQEI+DA++YLRL+A  +D  AFER++N P RG+GD 
Sbjct: 385 AFEERLILAGVPYRVVGGARFYERQEIRDAIAYLRLVAQPDDSLAFERIINLPRRGLGDA 444

Query: 422 TLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLE-------LVDALASDTAD 474
           +L  + + +R   ++L +A R  ++   L  +A  AL+ FL+       L DA+A D   
Sbjct: 445 SLQTLMRASRMASISLMRAAREAIETDELRPQARKALRAFLDDMGRWRSLADAMAPDEL- 503

Query: 475 LPLHVQTDRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAF 534
                    V+ +SG   M+ ++K    Q RVENL+ELV+A ++F           L AF
Sbjct: 504 ------CGTVLDESGYLEMWRKDKSPDAQGRVENLKELVSALKEFE---------SLGAF 548

Query: 535 LSHAALEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGG--RL 592
           L H +L   + +A A +DAV LMTLH+AKGLEF  VF+ G EE +FP + +LDE G   L
Sbjct: 549 LEHVSL-VMDNEARATEDAVTLMTLHAAKGLEFDTVFLPGWEEEIFPHRRALDENGAEAL 607

Query: 593 EEERRLAYVGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPTECVEE--------V 644
           EEERRLAYVG+TRA ++  +++  +RR+Y +     PSRFI ELP E VE          
Sbjct: 608 EEERRLAYVGLTRARKRAIISFVANRRVYNEWRACLPSRFIDELPPEVVERDSASGVYGS 667

Query: 645 RLRASVSRPVNHQRLGTPIS---------------QSDTGYKL-------------GQRV 676
             +     P    RLG P S                 DT ++              G RV
Sbjct: 668 GAQGYADAPGGWGRLGGPGSWGGGWGNAAPARVPAAGDTPWQTRDRSGDDQPSLRPGDRV 727

Query: 677 RHAKFGEGTIVNVEGSGEHCRIQVAFAGQGIKWLVAAYAR 716
            H KFG GT++    + +  R+++ F   GIK ++  + R
Sbjct: 728 FHDKFGGGTVL----AADQGRLEIDFDKAGIKKVMGGFVR 763