Pairwise Alignments

Query, 609 a.a., ATP-dependent DNA helicase RecQ from Dickeya dianthicola ME23

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

 Score =  557 bits (1435), Expect = e-163
 Identities = 287/593 (48%), Positives = 397/593 (66%), Gaps = 7/593 (1%)

Query: 13  AMQVLRETFGYQQFRPGQQAIINAAISGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVS 72
           A +VL++ FGY  FR  Q AII    SG D LV+MPTGGGKSLC+Q+PAL+  GL +VVS
Sbjct: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVS 64

Query: 73  PLISLMKDQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRGELKLLYIAPERLTTDGFL 132
           PLI+LM DQV  L+  GVAAA LNST + EQQ+ + +  RRGE+K+LY+APERL     L
Sbjct: 65  PLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRML 124

Query: 133 EQLTHWNTTLIAIDEAHCISQWGHDFRPEYRALGQIKQQFPALPIVALTATADETTRQDI 192
             L      L AIDEAHC+SQWGHDFR EY  LGQ+ + FP +P +ALTATAD+ TR++I
Sbjct: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEI 184

Query: 193 ARLLDLRDPLTNISSFDRPNIRYTLVEKFKPLDQLWLFVQGQRGKSGIVYCNSRAKVEDL 252
              L L+D    +SSFDRPNI Y +V K +P  QL  F+  +R  +GIVYC SR KV+++
Sbjct: 185 VERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVDEV 244

Query: 253 CARLQNRGLSVGAYHAGLENDRRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFD 312
            A L  +G     YHAGL ND RA  Q+ FL ++  ++VAT+AFGMGI+KPNVRFV H D
Sbjct: 245 AAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLD 304

Query: 313 IPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGVQ-LDIERHKLNAM 371
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+  L++ L+      +   +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLDAM 364

Query: 372 GAFAEAQTCRRLVLLNYFGENRQQACGNCDVCLDPPRRYDGLVDAQKALSCVYRVGQRFG 431
            +  E   CRR  LL YF E+  Q CG+CD C+D    +D    A++ALS ++R GQR+G
Sbjct: 365 LSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQRYG 424

Query: 432 IGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQLIHLGLLAQNIAHHSA 491
           +G++ +VL G +N+++R FGH  L V+G+GK +T+ +W S+ RQL+  GL   ++  +  
Sbjct: 425 VGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGYGG 484

Query: 492 LQLTESARPVLRGEAPLQ----LAVPRVISLSKPRAGQKTYGGNYDRKLFAKLRKLRKSI 547
           L+L+ + RP+L+GE  L+    L     +  SK +A Q   G   D+  +  LR LR+ +
Sbjct: 485 LRLSATCRPLLKGEVTLELRRDLKPATAVKSSKSQASQLVRGEERDQ--WEALRALRRKL 542

Query: 548 ADEDNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGAPFMTLI 600
           A+E  +PPYV+F D+TLLEM    P + +E+  V+GVG RKLER+G  F+ ++
Sbjct: 543 AEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVL 595