Pairwise Alignments

Query, 443 a.a., preprotein translocase subunit SecY from Dickeya dianthicola ME23

Subject, 439 a.a., preprotein translocase subunit SecY from Synechococcus elongatus PCC 7942

 Score =  335 bits (858), Expect = 2e-96
 Identities = 188/442 (42%), Positives = 281/442 (63%), Gaps = 23/442 (5%)

Query: 2   AKQPGLDFQSAKGGVGELKRRLLFVIGALIVFRIGSFIPIPGIDATVLAKLLEQQR--GT 59
           A++  L    A G    L+ R+L  +G LI+ R+G FIP+PGID    +  L+     G 
Sbjct: 11  AQETFLQMAQASG----LRGRILITVGLLILCRLGIFIPVPGIDRVAFSNDLQGNANLGG 66

Query: 60  IIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPALAEIKK-EGEAGRRKISQ 118
           +I   ++FSGG LS   +FALGI+PYI+ASII+QLLT   PAL +++K EGEAGRRKI+Q
Sbjct: 67  VIGFLDIFSGGGLSALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQ 126

Query: 119 YTRYGTLVLGIFQSIGIATGLPNMPGMQDLVINPGFAFYFTAVVSLVTGTMFLMWLGEQI 178
            TRY +L   + QSI IA  +          + PG  F     ++LV G+MF+MW+ E I
Sbjct: 127 LTRYVSLGWALLQSIVIAVWVTRY------AVTPGPLFTIQTALALVAGSMFVMWISELI 180

Query: 179 TERGIGNGISIIIFAGIVAGLPPAIGHTIEQARQGDLHFLLLLLVAVLVFAVTFF-VVFI 237
           TERGIGNG S++IF  IVA LP ++  T+E A+ GD   +  +++ ++VF  T   +VF+
Sbjct: 181 TERGIGNGASLLIFLNIVATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFV 240

Query: 238 ERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGG 297
           + G RRI V  A+RQ G RVY+ +S++LPL++N  GV+P IFAS+I++ P ++A++    
Sbjct: 241 QEGTRRIPVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANF---- 296

Query: 298 TGWNWLTTISLYLQPGQP---LYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVP 354
           T    +  I+ YL P  P   +Y L Y   I+ F +FY++L+ NP + A NLKK G+ +P
Sbjct: 297 TSNEVVLRIANYLSPNGPTPWIYALFYLVLIVAFSYFYSSLILNPVDLAQNLKKMGSSIP 356

Query: 355 GIRPGEQTAKYIDKVMTRLTLVGAMYITFICLIPEFMRDAMKVPFY--FGGTSLLIVVVV 412
           G+RPG  T++Y+  V+ RLT++GA+++  + +IP  +  A ++  +  FG TSLLI+V V
Sbjct: 357 GVRPGRATSQYVQGVLNRLTILGAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGV 416

Query: 413 IMDFMAQVQTLLMSSQYESALK 434
            +D   QVQT ++S +YE  +K
Sbjct: 417 AIDTAKQVQTYVISQRYEGMVK 438