Pairwise Alignments

Query, 305 a.a., ribonucleoside hydrolase RihC from Dickeya dianthicola ME23

Subject, 318 a.a., inosine-uridine preferring nucleoside hydrolase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  223 bits (567), Expect = 6e-63
 Identities = 132/296 (44%), Positives = 175/296 (59%), Gaps = 7/296 (2%)

Query: 5   PIILDTDPGIDDAVAIAAALFAPELELKLITTVAGNVDVEKTTRNALQLLHFWG-STVPV 63
           PIILD DPG DDA+A+  AL  P+L    +TT AGN   +KT  NAL++L     S +PV
Sbjct: 4   PIILDCDPGHDDAIALILALAHPDLVPLAVTTSAGNQTPDKTLNNALRILTLLNRSDIPV 63

Query: 64  ARGAATPLARVLRDAAYVHGESGMAGYDFVAHDRVALKKPAVQAMYECLTSSPEPMTLVT 123
           A GAA PLAR L  A  VHGE+G+ G              AV+ M + +  S +P+TL+ 
Sbjct: 64  AGGAAKPLARDLIIADNVHGETGLDGPALPNPSFSPQAITAVELMAQQIRKSHQPVTLIP 123

Query: 124 IGPLTNIALLLTQYPQCKNNIKRLVMMGGSSGRGNFTPNAEFNIAIDPEAAGRVFDSGID 183
            GPLTNIALLL  + +  + I+R+V+MGG++G GN+TP AEFNI +DPEAA  VF SGI 
Sbjct: 124 TGPLTNIALLLASHSELHDKIERIVLMGGAAGVGNWTPAAEFNIFVDPEAADIVFKSGIP 183

Query: 184 IVMCGLDVTNNAVLAPDYLETLAGLNRTGA-----MLHALFSHYRSGSMA-TGLRMHDLC 237
           I MCGLDVT+ A +  + +E +  +    A     +L     ++R       G  +HD C
Sbjct: 184 ITMCGLDVTHQAQIMDEDIERIRAIPNPVAKCVAELLDFFMIYHRDPKWGFVGAPLHDPC 243

Query: 238 AIAYLVKPALFTLTHCFVAVETRGEYTAGTTVVDLQHRLNRPANAQVALALDVDGF 293
            IA+L+KP LF    C+V +ET+ E T G TVVD      +PANA V   L+  GF
Sbjct: 244 TIAWLLKPELFDAQDCWVGIETQSELTLGMTVVDRYQLTGKPANATVLFGLNRQGF 299