Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 477 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase from Sinorhizobium meliloti 1021

 Score =  212 bits (540), Expect = 2e-59
 Identities = 146/391 (37%), Positives = 205/391 (52%), Gaps = 15/391 (3%)

Query: 24  ISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNHGAAALLVSK-HLP----IEVPQL 78
           I+ +S D+R +  G  F A+RG++ D HDYA  A+ +GAA L+VS+  LP    +  P +
Sbjct: 26  ITGISIDSRTIGDGEAFFAIRGDRVDGHDYAGIALANGAALLVVSEAKLPALGRLIAPMI 85

Query: 79  VVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEMTAAILRQCGNVLYTAGNFNND 138
           VVDD   A+  +    R +S A+++A+TGS GKT+ KEM   +L   G V  +  +FNN 
Sbjct: 86  VVDDVLEAMIRLGCVARDRSAAKIIAVTGSVGKTTTKEMLRHVLSPLGRVHASVASFNNH 145

Query: 139 IGVPLTLFRLAPEHDYAVIELGANHIGEIAYTTAMVRPEAALVNNLAAAHLEGFGSLDGV 198
            GVPLTL R+    D+ V E+G NH GEI   T MVRP  A+V ++AAAHL  F SLD +
Sbjct: 146 WGVPLTLARMPETTDFGVFEIGMNHAGEILPLTRMVRPHVAVVTSIAAAHLGNFTSLDEI 205

Query: 199 AQAKGEIFSGLPAQGVAIVNADS--HDEARWHDALTGKTRWRFSPQARAGVDFYASDVGI 256
           A AK EIF G+   G A++N DS  +D      A  G +    S  A    +F  ++   
Sbjct: 206 AAAKAEIFEGVVNGGHAVINRDSAQYDLLERAAAAAGVSHVH-SFGANPRSEFRLAEFAG 264

Query: 257 SERGTDFVLHTPAGAVAVTLPLPGRHNIANALAAAALSLAVGAPLDAVKTGLAQLQAVPG 316
              G+          + + +  PGRH   NALAA A +   GA  D V    A +Q   G
Sbjct: 265 GAEGSVLWAGIGGRTLEIAIGAPGRHIAENALAAIAAATLAGADTDRVAASFATMQPEKG 324

Query: 317 R--LFPIALAPGKL-LLDDSYNANVGSMTAAAQVLAEMP----GYRVMVVGDMAELGLGA 369
           R     + +  G L ++D+SYNAN  SM AA  +L +      G R+ V+GDM E+G  +
Sbjct: 325 RGLRHRLRIGTGHLTVIDESYNANPASMRAAISLLRDAEPAPGGRRIAVLGDMLEMGEHS 384

Query: 370 QACHRQVGEAARKANIDKVLSVGTLSAFIGD 400
            A H  +     +A I  V   G   A + D
Sbjct: 385 AAVHAALAGPVVEAGIADVWLAGPEMAHLRD 415