Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dechlorosoma suillum PS

 Score =  293 bits (750), Expect = 8e-84
 Identities = 187/460 (40%), Positives = 253/460 (55%), Gaps = 21/460 (4%)

Query: 4   VSLRQLADVLGARLVGEDLTISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNHGAA 63
           + L ++A        G ++    VSTD+R +  G LFVALRGE+FD H+Y A A   GA 
Sbjct: 2   MDLFEVARATNGTAYGSNVLFGGVSTDSRSVGRGELFVALRGERFDGHEYLAQAGERGAC 61

Query: 64  ALLVSKHL------PIEVPQLVVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEM 117
           A +V+          + +P + V DTRLALG +AG+ R +    ++A+TGS+GKTS KEM
Sbjct: 62  AAVVAVDTVEQLQGKVSLPLVAVADTRLALGALAGYWRAKFSLPLIAVTGSNGKTSTKEM 121

Query: 118 TAAILRQCGN---------VLYTAGNFNNDIGVPLTLFRLAPEHDYAVIELGANHIGEIA 168
            A+IL+             VL T GNFNNDIG+PLTL +L   H   VIE+G NH GEI 
Sbjct: 122 IASILQAQAVLDGYDPAMVVLATQGNFNNDIGLPLTLLKLRTTHRSGVIEMGMNHPGEIG 181

Query: 169 YTTAMVRPEAALVNNLAAAHLEGFGSLDGVAQAKGEIFSGLPAQGVAIVNADSHDEARWH 228
           Y T + +P  ALV N   AHLEG G L  VA+ K  I++GL   GVA+V+AD    A W 
Sbjct: 182 YLTRLAQPTVALVTNAQRAHLEGMGDLQQVAEEKATIYAGLKPGGVALVSADDAFAAYWK 241

Query: 229 DALTGKTRWRFSPQARAGVDFYASDVGISERGTDFVLHTPAGAVAVTLPLPGRHNIANAL 288
                +    F     A V      V +    T   L +P G  A+ L +PG HN  NA+
Sbjct: 242 GVNERRRVVTFGLDKPADV---GGKVQLHGLETRIDLTSPKGNAAIRLRVPGLHNARNAV 298

Query: 289 AAAALSLAVGAPLDAVKTGLAQLQAVPGRLFPIALAPGKLLLDDSYNANVGSMTAAAQVL 348
           AAAA +LA G  L AV  GL   + V GRL     A G ++LDD+YNAN  S+ A   VL
Sbjct: 299 AAAAAALAGGISLAAVVGGLESFRGVKGRLQQRQAAAGAVILDDTYNANPDSVRAGIDVL 358

Query: 349 AEMPGYRVMVVGDMAELGLGAQACHRQVGEAARKANIDKVLSVGTLSAFIGDVSGA-GEH 407
           A   G +++V+GDM E+G  +   H ++G  A+   +D++  +G  +A      GA G H
Sbjct: 359 AATVGRKILVLGDMGEIGAMSGQYHDEIGGYAKSQGVDQLHCLGEAAAQAARNFGAGGHH 418

Query: 408 FDNKTALIDRLRTLVTQHNTITVLIKGSRSAAMEQVVHAL 447
           + N  AL+  ++  +T     TVL+KGSR   ME+VV AL
Sbjct: 419 YKNLEALVQAVQAELT--GDTTVLVKGSRFMKMERVVDAL 456