Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

Subject, 510 a.a., Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase MurF from Mycobacterium tuberculosis H37Rv

 Score =  196 bits (498), Expect = 1e-54
 Identities = 159/513 (30%), Positives = 236/513 (46%), Gaps = 68/513 (13%)

Query: 1   MIRVSLRQLADVLGARLV-------GEDLTISEVSTDTRKLTTGCLFVALRGEKFDAHDY 53
           MI +++ Q+A+++G  +                V  D+R +  G LF+AL G + D HD+
Sbjct: 1   MIELTVAQIAEIVGGAVADISPQDAAHRRVTGTVEFDSRAIGPGGLFLALPGARADGHDH 60

Query: 54  AADAVNHGAAALLVSKHLPIEVPQLVVDDTRL---------------------ALGTMAG 92
           AA AV  GAA +L ++  P+ VP +VV                          AL  +A 
Sbjct: 61  AASAVAAGAAVVLAAR--PVGVPAIVVPPVAAPNVLAGVLEHDNDGSGAAVLAALAKLAT 118

Query: 93  WVRQQSRA---RVVALTGSSGKTSVKEMTAAILRQCGNVLYTAGNFNNDIGVPLTLFRLA 149
            V  Q  A    ++ +TGSSGKTS K++ AA+L   G V+   G+FNN++G P T+ R  
Sbjct: 119 AVAAQLVAGGLTIIGITGSSGKTSTKDLMAAVLAPLGEVVAPPGSFNNELGHPWTVLRAT 178

Query: 150 PEHDYAVIELGANHIGEIAYTTAMVRPEAALVNNLAAAHLEGFGSLDGVAQAKGEIFSGL 209
              DY ++E+ A H G IA    +  P   +V N+  AHL  FGS + +AQ K E+   +
Sbjct: 179 RRTDYLILEMAARHHGNIAALAEIAPPSIGVVLNVGTAHLGEFGSREVIAQTKAELPQAV 238

Query: 210 PAQGVAIVNADSHDEARWHDALTGKTRWRFSPQARAGV-DFYASDVGISERGTD-FVLHT 267
           P  G  ++NAD    A    A+   T  R    +R    D +A  V + E     F LH 
Sbjct: 239 PHSGAVVLNADDPAVA----AMAKLTAARVVRVSRDNTGDVWAGPVSLDELARPRFTLHA 294

Query: 268 PAGAVAVTLPLPGRHNIANALAAAALSLAVGAPLDAVKTGLAQLQAVP-GRLFPIALAPG 326
                 V L + G H + NAL AAA++L  GA ++ V   L     V   R+       G
Sbjct: 295 HDAQAEVRLGVCGDHQVTNALCAAAVALECGASVEQVAAALTAAPPVSRHRMQVTTRGDG 354

Query: 327 KLLLDDSYNANVGSMTAAAQVLA------EMPGYRVMVVGDMAELGLGAQACHRQVGEAA 380
             ++DD+YNAN  SM A  Q LA      E       V+G+MAELG  A A H ++G  A
Sbjct: 355 VTVIDDAYNANPDSMRAGLQALAWIAHQPEATRRSWAVLGEMAELGEDAIAEHDRIGRLA 414

Query: 381 RKANIDKVLSVGT------------LSAFIGDVSGAGEHFDNKTAL--------IDRLRT 420
            + ++ +++ VGT            L    G      +H  ++TA+        +  LR 
Sbjct: 415 VRLDVSRLVVVGTGRSISAMHHGAVLEGAWGSGEATADHGADRTAVNVADGDAALALLRA 474

Query: 421 LVTQHNTITVLIKGSRSAAMEQVVHALQENATC 453
            +   +   VL+K S +A +  V  AL  + TC
Sbjct: 475 ELRPGD--VVLVKASNAAGLGAVADALVADDTC 505