Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dianthicola ME23

Subject, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

 Score =  332 bits (850), Expect = 1e-95
 Identities = 166/391 (42%), Positives = 242/391 (61%), Gaps = 10/391 (2%)

Query: 2   QLRKTLLVGLVSVTLLSGCSLFDREEDVVKMSPLPQVTNQFTPTKVWSRSVGDGIGEFYS 61
           +L   +LV    + LL+GC+    EE+ V M+PLP V ++FTP  +WS SVGDG+G ++S
Sbjct: 3   KLFNQVLVAAGVLALLAGCA---SEEENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFS 59

Query: 62  NLHPIWQDSRVYAADRHGTVKALDLNSGEEKWRADLAEKTGLLSSNRPALLSGGVAVSGN 121
            L P +   +V+ A R G VKALD  +G+  W  DL  +         A LSGG+  +  
Sbjct: 60  KLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGS-------ARLSGGITAAFG 112

Query: 122 HVYVGSERAQLFALNADDGTLQWQTKVAGEVLSSPVVSDGMVIIHTSNGMLQALSESDGT 181
            +++GSE   + AL+A+ G   W + + GEVL++P   + +VI++TS G L AL++ DG 
Sbjct: 113 KLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGA 172

Query: 182 IKWTVNLDMPSLSLRGESAPTAAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGATE 241
            KWT++ ++P+L+LRG+S PTA  G    G  +GR++A +  +GQLIWQQ + QP GATE
Sbjct: 173 QKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATE 232

Query: 242 IARLNDVDTTPVVASNVVYALGYNGNLTALDLRSGQITWKREIGSVNDFIVDGDRIYLVD 301
           I RL DVD +P+V    ++ +G+NG L A+DLRSGQ  WKR   S  D   DG R+YLV 
Sbjct: 233 IDRLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVT 292

Query: 302 QDDRITALNTNGGVVIWRQGDLLHRNLTAPALYNGYLVVGDAEGYLHWVNTTDGRFVVQQ 361
             D + A++T  G  +W    L HR LTAP + + YLVVGDAEGYLHW++   G F+ QQ
Sbjct: 293 DKDHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQ 352

Query: 362 KVDGSGLLSKPVVASDKLLVQAKDGEVYAFT 392
            V+ SG    P+  +D  ++  ++G++   T
Sbjct: 353 LVNDSGFAVGPLALNDGYVIVTRNGQIKKLT 383