Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dianthicola ME23

Subject, 395 a.a., outer membrane protein assembly complex subunit YfgL (RefSeq) from Shewanella sp. ANA-3

 Score =  308 bits (790), Expect = 1e-88
 Identities = 154/390 (39%), Positives = 235/390 (60%), Gaps = 4/390 (1%)

Query: 5   KTLLVGLVSVTLLSGCSLFDREEDVVKMSPLPQVTNQFTPTKVWSRSVGDGIGEFYSNLH 64
           K LL   +S+ +LS CS  D EE+ V  S L  +     P   WS SVGDG+G++YS L 
Sbjct: 6   KNLLAAGLSLAMLSACSSSDVEEEPV--SELTAIQATVFPEVSWSASVGDGVGDYYSRLT 63

Query: 65  PIWQDSRVYAADRHGTVKALDLNSGEEKWRADLAE--KTGLLSSNRPALLSGGVAVSGNH 122
           P  +  +++AADR+G V A D  +GE  W+ D +E  +   L+ N+ A L+ GV  + N 
Sbjct: 64  PAVRYGKIFAADRYGEVVAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAARNK 123

Query: 123 VYVGSERAQLFALNADDGTLQWQTKVAGEVLSSPVVSDGMVIIHTSNGMLQALSESDGTI 182
           ++VG E   L ALNA+DG + W     GE+LS P V+D +V++ TS+G L+A +   G  
Sbjct: 124 IFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVADDVVVVSTSSGALEAFNVDTGAK 183

Query: 183 KWTVNLDMPSLSLRGESAPTAAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGATEI 242
            W   + +P+L+LRG  +     G   +G  +G+V+ V+ N GQ  W+Q I  P G  E 
Sbjct: 184 LWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEF 243

Query: 243 ARLNDVDTTPVVASNVVYALGYNGNLTALDLRSGQITWKREIGSVNDFIVDGDRIYLVDQ 302
            R+ DVD TP++  + +YA+ YNGNL +++LR+G++ W R+  S N+    G  ++LVD 
Sbjct: 244 TRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFLVDD 303

Query: 303 DDRITALNTNGGVVIWRQGDLLHRNLTAPALYNGYLVVGDAEGYLHWVNTTDGRFVVQQK 362
             RI +++   G+ +W   +L +R LT+PA+Y  YLVVGD EGYLH+++ + G  V + +
Sbjct: 304 HSRIYSVDRRNGLELWSNSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVGRIQ 363

Query: 363 VDGSGLLSKPVVASDKLLVQAKDGEVYAFT 392
           VD SGL S+P+V  DK+ VQ + G++   T
Sbjct: 364 VDSSGLFSQPLVVDDKIYVQGRSGKLAVVT 393