Pairwise Alignments

Query, 285 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  125 bits (315), Expect = 7e-34
 Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 28/263 (10%)

Query: 18  AAAAFCAGVQAKEWKSVTIATEGSYEPWNLTLPGGKLGGFEPELMTLLCQRMNIQCKLVV 77
           AAA+   G QA   + + I TEG+Y P+NL    GK+ GF+ ++   LC +M ++C++V 
Sbjct: 11  AAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVECEVVT 70

Query: 78  QNWDGMIAGLQAGKFDVMMDAIVITPERKQVVAFSLPYASTPASFITVKGKLALPVEADK 137
            +WDG+I  L AGKFD +  ++ +T ERK  V F+  Y +    F+  K           
Sbjct: 71  SDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKN---------- 120

Query: 138 TMIKLASDPAQIKPAVANLRRALQGKTIGIASGTVYTPFIDSYFRDVATVREYTASADAI 197
             ++  +D   +K           GK IG    T+   +++     V  ++ Y    +A 
Sbjct: 121 --VEFQTDEGYLK-----------GKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAY 167

Query: 198 LDLQAGRIDAVFDDVTFANSIIGKPENNNLTLGGPQLTGPIWGEGE-ALGFRKSDPELKA 256
           LDL +GR+D +  D       +      N    G     P++ + + A+  RK + EL+ 
Sbjct: 168 LDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGE----PVFDDDKIAIAVRKGNDELRE 223

Query: 257 KFDAAIKTALADGTVKTLSEKWF 279
           + + A+   +ADGT K +++K+F
Sbjct: 224 RLNKALAEIIADGTYKQINDKYF 246