Pairwise Alignments

Query, 205 a.a., type II secretion system assembly factor GspB from Dickeya dianthicola ME23

Subject, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 5e-14
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 51  PAAAIAAPPGKIVAP--TTGAEATTSSPSQSIADNRETAASPA------ATAEDKSPKPA 102
           P   + A    IVAP  T  A    S+ ++++ D   T  SP       A   D+S +PA
Sbjct: 109 PEEDVTALADNIVAPPATIQASGQQSASNKALGDLDLTQLSPELALRVQAIMRDQSSEPA 168

Query: 103 AWQTAKA-------------GELPYVAFSAHVYTSDPDKRSVTLNGERYREGDSPYQGLV 149
              T  +             G+LP + F  H ++S+  KR + +NG  YREGD     + 
Sbjct: 169 TPSTPTSAAVSLTQHSDRYQGQLPALNFQMHAFSSNEQKRWIKVNGVEYREGDMLTPEVK 228

Query: 150 IEQIEQDMVIFSFNGEPFILDSLQDWPG 177
           +E I+    +  F GE   + +L DW G
Sbjct: 229 LESIKPQSSVIIFGGEEIEIPALYDWKG 256