Pairwise Alignments

Query, 599 a.a., NADH-quinone oxidoreductase subunit C/D from Dickeya dianthicola ME23

Subject, 561 a.a., NADH-ubiquinone oxidoreductase (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (499), Expect = 2e-54
 Identities = 137/487 (28%), Positives = 230/487 (47%), Gaps = 55/487 (11%)

Query: 120 DLSMPTLIKLFPNANWYEREVWDMFGITFKGHPHLTRIMMPQTWQGH--PLRKDFPARAT 177
           D  +PTL  L P A+W+ERE +DM G+  +GHP+  R+++ + W     P+RKDFP    
Sbjct: 94  DPKVPTLTDLIPGADWHERENYDMLGVVAEGHPNPRRLLLSEDWPEDLFPMRKDFPH--- 150

Query: 178 EFDP----FVLTKQREDMEMESLTFKPEEWGMTRGTDNEDFMFLNLGPNHPSAHGAFRII 233
           +F P     + T  R+ +  ES                     +++GP  P+        
Sbjct: 151 DFKPPKAEKITTPLRDPLGNESKA-----------------TIISVGPFFPTLDEPAYFR 193

Query: 234 LQLNGEEIVDCIPDIGYHHRGAEKMGERQSWHSYIPY-TDRIEYLGGCVNEMPYVLAVEK 292
           L   GEEI+       + HRG EK+ +    ++ +P+  +R+  + G V+   Y +AVE 
Sbjct: 194 LFCEGEEIIGSDYRGFFSHRGIEKLSDTVLDYNQVPFMAERVCGICGFVHSACYCMAVED 253

Query: 293 LAGIEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAI 352
            AGIE+P R K IR ++ EL R++SHLL++      +G  T +  ++  R+ I  LVE I
Sbjct: 254 AAGIEIPPRAKYIRSIMMELERLHSHLLWLGLAGHYLGFDTVLMQSWRIREPIMWLVEEI 313

Query: 353 TGYRMHPAWFRIGGVAHDLPRGWERLLREFLEWMPARLDTYVKAALQNSILKGRSQGVAA 412
           TG R       +GGV  DL       +   +  +    +  + A   +  LK R   V  
Sbjct: 314 TGNRKTYGMNLVGGVRRDLDSAICDKIMAAVTKIGIECEELISAVAGDESLKMRMVKVGV 373

Query: 413 YNAKDALEWGVTGAGLRATGIAFDVRKSRPYSGYENFDFEIPVGDGVSDCYSRVMLKVEE 472
            + +DA    V G   RA+G+  D R   PY+ + + DF+    +G  D ++R +++V+E
Sbjct: 374 LSHEDARGICVVGPTARASGVHIDARADYPYAAFPDLDFKPSFHEG-GDIWARTLVRVDE 432

Query: 473 LRQSLRILEQCLKNMPEGPFKADHPLTTPPPKERTLQHIETLINHFLQVSWGPVMPANES 532
           +R S+ +++Q +  +PEG   A                            +GP+    E 
Sbjct: 433 VRSSVDLIKQMITKLPEGEIMA---------------------------GFGPIPAWREG 465

Query: 533 FQMVEATKGVNSYYLTSDGSTMSYRTRIRTPSFPHLQQIPAVIRGCLVSDLIVYLGSIDF 592
           + + EA +G   +Y+ +      YR R+R  ++P LQ +P +++G  + D  + +GSID 
Sbjct: 466 YGIAEAPRGECVHYVQTGKDNRPYRWRVRAATYPQLQAVPLMLKGMSIGDFPIIIGSIDP 525

Query: 593 VMSDVDR 599
             S  +R
Sbjct: 526 CFSCTER 532