Pairwise Alignments

Query, 770 a.a., carbamoyltransferase HypF from Dickeya dianthicola ME23

Subject, 781 a.a., (NiFe) hydrogenase maturation protein HypF (RefSeq) from Shewanella loihica PV-4

 Score =  452 bits (1164), Expect = e-131
 Identities = 293/781 (37%), Positives = 408/781 (52%), Gaps = 45/781 (5%)

Query: 9   IEIRVKGKVQGVGFRPYVWQIAHRLGAKGSVLNDGAGVLVRLWPVSAEAD-FIAALYAEC 67
           + + V G VQGVGFRP+V++ A  LG  G   N   GV V L    A    F+ AL    
Sbjct: 7   VRLAVTGIVQGVGFRPFVYRWATELGLLGLTFNHSKGVTVELQGSDAAIHAFVEALTQTP 66

Query: 68  PPLAQIDQVTCQPYCWETPPDDFIIEHSGAGQMDTHIVPDAATCDACRQELFDPCDRRYR 127
           PPLA+ID ++      E      I+      +    +  D ++C  C  E+ DP +R Y+
Sbjct: 67  PPLARIDSLSQTELPLEECNSFEIVHSQADAKAVVAVSSDKSSCQECLDEIMDPGNRHYQ 126

Query: 128 YSFINCTHCGPRFTIIRQMPYDRPNTAMAAFPFCPTCQQEYRHPADRRFHAQPNACHTCG 187
           Y F NCT+CGPR+T+IR +PYDRPNTAMA F  C  C   Y++P DRR+HAQP +C  CG
Sbjct: 127 YPFTNCTNCGPRYTLIRALPYDRPNTAMAEFAMCDACAAAYQNPLDRRYHAQPVSCPDCG 186

Query: 188 PQVWLSNASG-TVARDDDAIIQAAAALCDGRIVAVKGLGGFHLACDATDAQAVARLRARK 246
           PQ+ L +A    +A  + A+  A   L  G+ +A+KGLGGFHL CDAT+ +AV +LR+RK
Sbjct: 187 PQLSLLDAQQIPLAEKNAALDLAVELLAQGKTLAIKGLGGFHLVCDATNHEAVMQLRSRK 246

Query: 247 HRPAKPLAVM---LPEADWLARCSTVTEPASALRMMQSPAAPIVLL--PLRHDGA----- 296
            RPAKP AVM   LP A  LA C +  E     +++QS   PI LL   L  D +     
Sbjct: 247 QRPAKPFAVMCASLPMAKTLA-CGSDAE----WQLLQSAERPITLLQRALNKDESSSDAL 301

Query: 297 ----LAAEIAPGLDDVGLMLPANPLQHLLLAAVARPLVMTSGNAGGKPPALDNMQALAEL 352
               L+  +APG+D +GL LP  PL  LLL+ + RPLV TS N  G+P      Q    L
Sbjct: 302 SSYVLSPAVAPGIDRLGLFLPYTPLHQLLLSRLNRPLVATSANRSGEPIITHAEQIFERL 361

Query: 353 AAIADLWLLHDRDIVQRADDSVVRMQGEQAEMLRRARGYVPDALPLPPGFSQQPSLLAMG 412
             + D  L H+R+I+   DDSVV+M  ++ +++R ARGY P  L LP    Q+   LA+G
Sbjct: 362 GEVVDAVLDHNREILNGCDDSVVQMVDDKLQVIRLARGYAPLTLALPEEVPQE--TLAVG 419

Query: 413 ADLKNTFCLLRDGAAIVSQHLGDLADDEVEQQYRQAQALFADIYRFTPQAIAVDAHPGYV 472
           A  KN+     D   ++S H+GDL   E EQ +    A F  +Y+F+P+ +  D HP Y 
Sbjct: 420 AQQKNSIAFGFDHNLVLSPHIGDLFSLEAEQYFIDTLATFKRLYQFSPKHLVSDKHPDYA 479

Query: 473 SRRLGQQQAEQLGIPCIEVLHHHAHIVACLAEHQWPRDAGPVIGLALDGIGYGGDNRWWG 532
           S    QQQ +  GI   +V HH+AHI++ +A +Q       V+G + DG G G + + WG
Sbjct: 480 STIWAQQQKDAQGIAYTQVQHHYAHILSVMAVNQ---RVDKVLGFSFDGTGLGDERQLWG 536

Query: 533 GECLRVDYGQCQHLGGLPAVALPGGDLAARQPWRNLLAQCLA-FVPDWETLAPNWETLAP 591
           GE +  D    + +  L  +AL GG+ A + P R +LA   A + PD     P    LA 
Sbjct: 537 GEAMLADISGFKRVAHLSPMALIGGEQAIKDPRRIMLALLFARYSPDEIKALP----LAS 592

Query: 592 AGVIPTDAVPLLTRAIGRGLNAPLASSAGRLFDAVAAACGFAGEQSWEGEAACWLEALAR 651
              +P   +  L     +G+   + SS GRLFDA A   G      +EG+A   +EA A 
Sbjct: 593 LEELPASLIGNLHTLWHKGVAIQMTSSIGRLFDATACLLGLMQTTQFEGQAGMLIEAKAN 652

Query: 652 -----QHQDDRPPVTLPLAGTQLD----LATFWRQFLAYRAAPADRAFAFHL---ALADG 699
                Q + +     L  +  ++D    LA+ W Q +       D+     L      + 
Sbjct: 653 EVSEAQLESELAAADLAFSLCEIDGVWQLASLWEQMVDALLKWQDKPEGISLIARGFMNA 712

Query: 700 LAALVRQAAREHGLNTVACSGGVMHNRLLVTLLRERL--ADFTLLSPSRLPAGDGGLALG 757
           LA  V   A +H    VA  GGV  NR L++  R+RL  A   +L   ++P  DGG+ALG
Sbjct: 713 LAQAVTDCAIKHSGFDVALCGGVFQNRYLLSETRKRLEMAKIKVLDSHQVPVNDGGIALG 772

Query: 758 Q 758
           Q
Sbjct: 773 Q 773