Pairwise Alignments

Query, 770 a.a., carbamoyltransferase HypF from Dickeya dianthicola ME23

Subject, 808 a.a., hydrogenase maturation protein HypF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  425 bits (1092), Expect = e-123
 Identities = 287/814 (35%), Positives = 415/814 (50%), Gaps = 90/814 (11%)

Query: 10  EIRVKGKVQGVGFRPYVWQIAHRLGAKGSVLNDGAGVLVRLWPVSAEAD-FIAALYAECP 68
           ++ + G VQGVGFRP+V++ A  L   G+VLN+  GV++ L   SA  D FI  L    P
Sbjct: 6   QLHITGIVQGVGFRPFVYRWATELQLTGTVLNNAKGVMIELQGPSARLDIFIQELATNPP 65

Query: 69  PLAQIDQVTCQPYCWETPPDDFIIEHSGAGQMDTH---------IVPDAATCDACRQELF 119
           PLA+ID ++      +     F I  S +    T          +  D +TC  C  ++ 
Sbjct: 66  PLARIDHISHGQLAIKLAETHFEIVQSDSQSDGTKDRSLAALVAVSADKSTCQDCLDDMH 125

Query: 120 DPCDRRYRYSFINCTHCGPRFTIIRQMPYDRPNTAMAAFPFCPTCQQEYRHPADRRFHAQ 179
           +P DR + Y+F NCT+CGPR++II  +PYDR +TAMA F  CP C + Y+ P +RR+HAQ
Sbjct: 126 NPQDRHFGYAFTNCTNCGPRYSIINALPYDRHHTAMADFAMCPDCAKAYQDPLNRRYHAQ 185

Query: 180 PNACHTCGPQVWLSNASGTV--------ARDDDAIIQAAAA--LCDGRIVAVKGLGGFHL 229
           P +C  CGPQ+ L    G +        ++D+   + +AAA  L  G I+A+KGLGGFHL
Sbjct: 186 PVSCPKCGPQLSLKTPKGELIALTPSLNSQDNSMAVLSAAANMLAQGHILAIKGLGGFHL 245

Query: 230 ACDATDAQAVARLRARKHRPAKPLAVMLPEADWLARCSTVTEPASALRMMQSPAAPIVLL 289
            CDA ++ AV++LR RK R AKPLAVM+P  +   +  T TE  +  + + SP  PIVL+
Sbjct: 246 MCDARNSHAVSQLRQRKQRKAKPLAVMMPSIEMAKQYVTGTE--AEWQTLSSPERPIVLM 303

Query: 290 PLRHDGALAAEIAPGLDDVGLMLPANPLQHLLLAAVARPLVMTSGNAGGKPPALDNMQAL 349
               +  L  EIAP +  +G+ LP  PL HLLL+    PLV TS N  G+P   D    +
Sbjct: 304 QALDEHDLNPEIAPNIPKLGVFLPYTPLHHLLLSQFNGPLVATSANVSGEPIITDCDALI 363

Query: 350 AELAAIADLWLLHDRDIVQRADDSVVRM------QGEQAEMLRRARGYVPDALPLPPGFS 403
           ++L  + D  + H+R I+   DDSVV++         Q ++LR ARGY P + PL    +
Sbjct: 364 SQLGHVVDAIVDHNRPILNGCDDSVVQLIQQPNGSTPQVQVLRLARGYAPLSFPLTAPLT 423

Query: 404 QQPSLLAMGADLKNTFCLLRDGAAIVSQHLGDLADDEVEQQYRQAQALFADIYRFTPQAI 463
           +  S+LA+GA  KN           +S H+GDL     EQ + +  A FA +Y F+P+ I
Sbjct: 424 R--SILAVGAQQKNAIAFGFGANVFLSPHIGDLFSVSAEQYFERTLATFARLYHFSPELI 481

Query: 464 AVDAHPGYVSRRLGQQQAEQL---------GIPCIEVLHHHAHIVACLAEHQWPRDAGPV 514
             D HP Y   R  + Q ++           I  + V HHHAH+++ +A +Q+     PV
Sbjct: 482 VHDKHPDYAPSRWAEAQQQKSPDTQSGTSGSIQTLSVQHHHAHVLSVMAINQYQE---PV 538

Query: 515 IGLALDGIGYGGDNRWWGGECLRVDYGQCQHLGGLPAVALPGGDLAARQPWRNLLAQCLA 574
           +G + DG G G D   WGGE L     + + L    A++L GG+ A +QP R LLA    
Sbjct: 539 LGFSFDGTGLGDDGSLWGGEVLLTRLDKAERLAHFEAISLLGGEQAIKQPVRLLLALL-- 596

Query: 575 FVPDWETLAPNWETLAPAGVIPTDAVPLL----------TRAIGRGLNAPLASSAGRLFD 624
                      +E ++ A V   D +P+L             I +  +   +SS GRLFD
Sbjct: 597 -----------FEQMSLAAVQALD-LPILKSLTPITLSNLHRIWQNGHTIKSSSVGRLFD 644

Query: 625 AVAAACGFAGEQSWEGEAACWLEALARQHQDDRPP---VTLPLAGTQLD--------LAT 673
           A+A A G      +EG+A   +EA AR+      P   + LPL  ++ D         + 
Sbjct: 645 ALACALGLIDTTQFEGQAGMLIEAAARRADKQHLPSLILDLPLCSSEDDPRQVQVWCSSQ 704

Query: 674 FWRQFLAY-RAAPADR------AFAFHLALADGLAALVRQAAREHGLNTVACSGGVMHNR 726
            ++Q + +   AP         A AF  +L D   A+   AAR   L    C GGV  N+
Sbjct: 705 LFKQLIVHITEAPLSSHRQSIIARAFLHSLGD---AICSYAARYPSLPIALC-GGVFQNQ 760

Query: 727 LLV--TLLRERLADFTLLSPSRLPAGDGGLALGQ 758
            L+   L +  L    +L    +P  DGG+ALGQ
Sbjct: 761 YLLEYCLSKLHLQGNIVLPNKHIPVNDGGIALGQ 794