Pairwise Alignments

Query, 1016 a.a., formate dehydrogenase-N subunit alpha from Dickeya dianthicola ME23

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  168 bits (426), Expect = 1e-45
 Identities = 124/433 (28%), Positives = 185/433 (42%), Gaps = 83/433 (19%)

Query: 50  CTYCSVGCGILMYSLGDGAKNASASIYHIEGDPDHPVSRGSLCPKGAGLVDFIHSDQRLK 109
           C YC  GCGI +  + DG    S           HPV+ G +C KG    +F+HS+ RL 
Sbjct: 11  CPYCGTGCGIDLV-VKDGKVVDSHPFKR------HPVNEGKVCIKGNYCYEFVHSEDRLT 63

Query: 110 YPEYRAPGSDKWQRISWEEAFDRITRLMKKDRDANFVEKNAAGVTVNRWLTTGMLCSSAA 169
            P  +  G  ++   +W+EA D I   +K+                           +  
Sbjct: 64  KPLIKKNG--EFIEATWDEALDLIAGKLKQYSPDE----------------VAFFSCARG 105

Query: 170 SNETGILDQKFARA-LGMIGIDTQARLCHGPTVAALAPTFGRGAMTNNWVDIKNANVILV 228
           +NE     QKFAR  L    +D  AR+ H PTV  L   FG GAMTN+  D+  A+V+L+
Sbjct: 106 TNEESYALQKFARTVLKTNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLI 165

Query: 229 MGGNPAEAHPVGFKWAVEAKIHNGAKLIVVDPRFNRSAAVADMYSPIRAGSDITFLLGVV 288
            G N  EAHP+  +  V+AK  NG K+I +DPR   +A +AD++  +  GS+I  +  + 
Sbjct: 166 YGSNTFEAHPLIARSIVKAK-ENGTKIIAIDPRTTHTAKMADLHLKLIPGSNIDLINTIT 224

Query: 289 NYLLSYDKVQMPYVKAYTNASLIVRDDYHFDEGIFSGYDEQKRQYDRTSWQYELDENGFA 348
           N ++        ++K  T                  GYDE                    
Sbjct: 225 NIIIQEGMADEEFIKNRT-----------------EGYDE-------------------- 247

Query: 349 KRDDTLSHPRCVWNLLKEHASRYTPDLVTNVCGTPKPDFLTICEQLASTCVPDRTATIMY 408
                          LK+  S+YT +    + G P    L       S       A+IMY
Sbjct: 248 ---------------LKDVVSKYTLEKTAELSGIPAETILEAARMYGSA----ENASIMY 288

Query: 409 ALGWTQHTAGAQIIRTAAMIQLLLGNIGMAGGGVNALRGHSNIQGYTDLGLLSLNLPGYM 468
            LG T++T G   +++   + ++ GN+G  G GVN LRG +N+QG  D+G L    PGY 
Sbjct: 289 CLGVTEYTFGVDNVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGYQ 348

Query: 469 PLPSEKQTSLNMY 481
            +    +   N++
Sbjct: 349 KVGEAYERLENLW 361



 Score = 52.8 bits (125), Expect = 8e-11
 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 50/200 (25%)

Query: 554 VQGFNPMAAFADSNRARDALKKLKYLVIIDPLATETSNFWQNHGELNDVDPGKIQTEVFR 613
           + G +PM A AD N    ALK L + V+ D   TET+       +L DV           
Sbjct: 390 IVGEDPMVADADINHVEKALKSLDFFVVQDIFLTETA-------KLADVV---------- 432

Query: 614 LPSSCFAEENGSIVNSGRWLQWHYQGAEPPGEARHDGVILAGL-----------FLRLRE 662
           LP++C+AE++G+  NS R +Q   +  + PG+A  D +I+  L           F    E
Sbjct: 433 LPAACWAEKDGTFTNSERRVQRIRKAVDAPGDALPDWLIVRKLAEKMGAGEKLNFESASE 492

Query: 663 LYAKEGGANPE---------PVLNMSWDYLEPEDPSAEEITKE----ANG---------R 700
           ++ +     P+          +  + W    PEDP    + KE     NG         +
Sbjct: 493 IFDEMAKVIPQYAGMSFERLGIDGLQWPCKTPEDPGTPILHKEKFLRPNGLGKFTPVEHK 552

Query: 701 ALADLYDDKGNLLLKKGQLL 720
              +L D++  L+L  G+++
Sbjct: 553 DADELIDEEYPLILTTGRII 572



 Score = 50.4 bits (119), Expect = 4e-10
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 17/131 (12%)

Query: 887  EEFPFVATTYSITELFRHWTKHARLNAIVQP--EQFVEIGEGLAKLKGIQGGDVVKVSSK 944
            EE+P + TT  I   +   T   R ++I     E F+EI    AK  GI+ G+ V+VSS+
Sbjct: 560  EEYPLILTTGRIIFHYNSGTMTRRCDSITNEIDENFIEINTEDAKELGIKPGEKVRVSSR 619

Query: 945  RGYIKAKAVVTKRIRTLTIQGKPVETIGVPCHWGFEGTTQKGFMANILTPHVGDANSQTP 1004
            RG + A A VT+ +    I+G     + +  H+  E T       N LT    D  S+T 
Sbjct: 620  RGTVNADARVTENV----IKG----VVYMSFHFLEEAT-------NKLTNSAYDPVSKTA 664

Query: 1005 EYKAFLVNVEK 1015
            E K   V VEK
Sbjct: 665  ELKICAVKVEK 675