Pairwise Alignments

Query, 1016 a.a., formate dehydrogenase-N subunit alpha from Dickeya dianthicola ME23

Subject, 1004 a.a., selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1282 bits (3318), Expect = 0.0
 Identities = 604/1014 (59%), Positives = 761/1014 (75%), Gaps = 12/1014 (1%)

Query: 3    VSRRQFFKICAGGMAGTTVTALGFSPSAALAETRQYKLLRARETRNNCTYCSVGCGILMY 62
            ++RRQFFK+CA G A + ++ALG     A A  R++KLL A+ETRNNC YCSVGCG+LMY
Sbjct: 1    MNRRQFFKLCAAGAATSAISALGLMSEKAYAAVREFKLLGAKETRNNCPYCSVGCGLLMY 60

Query: 63   SLGDGAKNASASIYHIEGDPDHPVSRGSLCPKGAGLVDFIHSDQRLKYPEYRAPGSDKWQ 122
            S G G KN+  +I+HIEGD DHPV+RG+LC KGAGLVD+++S  RL+YPEYRAPGS+KW+
Sbjct: 61   SQGSGGKNSEHAIFHIEGDADHPVNRGALCSKGAGLVDYVNSPHRLQYPEYRAPGSNKWE 120

Query: 123  RISWEEAFDRITRLMKKDRDANFVEKNAAGVTVNRWLTTGMLCSSAASNETGILDQKFAR 182
            RISW++AF RI RLMK DRDAN +EKNA GVTVNRWLTTGM+ SS  +NE+G+  QKFAR
Sbjct: 121  RISWQDAFKRIARLMKDDRDANLIEKNADGVTVNRWLTTGMMTSSGMANESGLATQKFAR 180

Query: 183  ALGMIGIDTQARLCHGPTVAALAPTFGRGAMTNNWVDIKNANVILVMGGNPAEAHPVGFK 242
            ALG++ IDT AR  H PTVA+LAPTFGRGAMTN+W+DIKN+NV+++MGGN AEAHPVGF 
Sbjct: 181  ALGLVAIDTIARNUHSPTVASLAPTFGRGAMTNHWIDIKNSNVVIIMGGNAAEAHPVGFG 240

Query: 243  WAVEAKIHNGAKLIVVDPRFNRSAAVADMYSPIRAGSDITFLLGVVNYLLSYDKVQMPYV 302
            W  EA  HN AKLIVVDPRFNRSA++AD Y+PIR+G+DI FLLGV+ YL+S ++V   YV
Sbjct: 241  WVTEAMQHNNAKLIVVDPRFNRSASLADHYAPIRSGTDIAFLLGVIRYLISTNQVNFDYV 300

Query: 303  KAYTNASLIVRDDYHFDEGIFSGYDEQKRQYDRTSWQYELDENGFAKRDDTLSHPRCVWN 362
            KAYTNAS +VRDD+ F +G+FSG+DE K +Y++ SW Y+LDE+G+A  D+TL HPRCVWN
Sbjct: 301  KAYTNASYLVRDDFDFHDGLFSGFDEAKGEYNKESWFYQLDEDGYAIVDETLEHPRCVWN 360

Query: 363  LLKEHASRYTPDLVTNVCGTPKPDFLTICEQLASTCVPDRTATIMYALGWTQHTAGAQII 422
            LLK+H  RY    V+N+ GTP  D+  +C+ +AST   DR AT MYALGWT H+ GAQ I
Sbjct: 361  LLKQHVERYDFATVSNITGTPTEDYQVVCDAIASTHTKDRVATFMYALGWTHHSKGAQNI 420

Query: 423  RTAAMIQLLLGNIGMAGGGVNALRGHSNIQGYTDLGLLSLNLPGYMPLPSEKQTSLNMYL 482
            R+ AMIQLLLGNIG  GGGVNALRGH+N+QG TD+GLL+ +LPGY+ LP++K+ +L  +L
Sbjct: 421  RSMAMIQLLLGNIGQLGGGVNALRGHANVQGSTDMGLLAQSLPGYLKLPNDKEPTLAAHL 480

Query: 483  DQITPKALLADQVNYWKNTPKFFISMMKSFWGNKATKENDWGYDWLPKWDKSYDALAYSR 542
               TPK L   Q NYW+N PKF++S++K+FWG  AT EN++GY WLPKWD+ YD   +  
Sbjct: 481  AANTPKPLRPGQTNYWQNYPKFYVSLLKAFWGENATPENEFGYQWLPKWDQMYDFGKHLD 540

Query: 543  MMLDGKVNGYIVQGFNPMAAFADSNRARDALKKLKYLVIIDPLATETSNFWQNHGELNDV 602
            MM  GKVNG IVQG N + +  + N+   AL  LK+LV++D L++ET+ FWQN    N+V
Sbjct: 541  MMYRGKVNGCIVQGVNAINSMPNRNKNIKALSNLKFLVVLDNLSSETATFWQNEPGFNEV 600

Query: 603  DPGKIQTEVFRLPSSCFAEENGSIVNSGRWLQWHYQGAEPPGEARHDGVILAGLFLRLRE 662
            D   IQTEVFRLP++ FAEE GSIVNSGRW+QWHY+ A PPGEA  D  I++GL L LR+
Sbjct: 601  DTASIQTEVFRLPATVFAEEEGSIVNSGRWMQWHYKWANPPGEAMSDSEIVSGLLLELRK 660

Query: 663  LYAKEGGANPEPVLNMSWDYLEPEDPSAEEITKEANGRALADLYDDKGNLLLKKGQLLPD 722
            LY +EGG  PEP+  ++W+Y +P +PS+ E+TKE NG      YD      +   + +  
Sbjct: 661  LYREEGGKLPEPIQAINWNYTDPHNPSSIELTKELNG------YD------VATKRQISS 708

Query: 723  FSLLRDDGSTASFCWIYAGSWTEAGNQMARRDNADPSGLGCTPGWAWCWPQNRRILYNRA 782
            F+ L+ DGSTAS CW+YAGSWTEAGNQMARRDN DPSG G TPGWA+ WP NRR+LYNRA
Sbjct: 709  FAELKADGSTASACWVYAGSWTEAGNQMARRDNHDPSGKGITPGWAFAWPLNRRVLYNRA 768

Query: 783  SADEQGRPWDPKRELIHWNGQKWTGIDVPDFAATVPPGSAAGPFIMNAEGLGRLFAIDKM 842
            S D  G+PWD  R+++ W   KW GIDVPDF A + P  +A PFIM A+G+GR FA+  +
Sbjct: 769  SCDVNGKPWDEHRKIVEWKDGKWEGIDVPDFNAKLNPQESAHPFIMQADGVGRFFALKLL 828

Query: 843  AEGPFPAHYEPLESPLKTNPVYSKVQVNPAARILPADRPYMGTVEEFPFVATTYSITELF 902
             EGPFP HYEP+ESP+ TNP++  V  +P  R     +  +GT EE+P+  TTYS+TE F
Sbjct: 829  KEGPFPEHYEPVESPIGTNPLHPNVVHSPVLRWFEGVKDTIGTKEEYPYACTTYSLTEHF 888

Query: 903  RHWTKHARLNAIVQPEQFVEIGEGLAKLKGIQGGDVVKVSSKRGYIKAKAVVTKRIRTLT 962
              WT H RL AI  PE FVE+ E LA  KGI+ GD VKVSSKRG+I  KA+VTKR+R L 
Sbjct: 889  NFWTTHCRLAAIAMPETFVEMNEQLAAEKGIKNGDWVKVSSKRGHILTKALVTKRMRPLQ 948

Query: 963  IQGKPVETIGVPCHWGFEGTTQKGFMANILTPHVGDANSQTPEYKAFLVNVEKA 1016
            + G+ V T+G+P H      T+K +  N+LT  +GDAN+  PEYKAFLVNVEKA
Sbjct: 949  VNGQTVHTLGIPRHGSHNALTRKSYSCNVLTTEMGDANTGVPEYKAFLVNVEKA 1002