Pairwise Alignments

Query, 882 a.a., nitrate reductase from Dickeya dianthicola ME23

Subject, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (725), Expect = 2e-80
 Identities = 229/794 (28%), Positives = 355/794 (44%), Gaps = 117/794 (14%)

Query: 5   RTTCPYCGVGCGVIATPQPDGRVTIEGDSRHPANLGRLCVKGSALGDTLDLQGRLLWPLA 64
           +  C +CG GC V+   Q    V  +GD   P N G  C+KG  L   +  Q RL  PL 
Sbjct: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104

Query: 65  ---DG--HR------VSWDQALGRVAQSLGDIIAQHGPQAVAFYGSGQLLTEDYYVANKL 113
              DG  H+      VSWD A   +A+     +   GP +V  +GSGQ    + Y A KL
Sbjct: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164

Query: 114 MKGFIGSANMDTNSRLCMASAVVGYKRALGADAVPCNYEDIEQADLVVLVGSNTAWAHPV 173
           MK    S N+D N+R CMASAVVG+ R  G D     Y+D E AD  VL GSN A  HPV
Sbjct: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224

Query: 174 VYQRLVQAKQQRPHMRVVVIDPRHTATCDAAELHLPLAPGSDAGLFNGLLRWLAQRNA-- 231
           ++ R+   +   PH++V V+   +  + + A+      P SD  + N +  ++ Q +A  
Sbjct: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284

Query: 232 ------------ALPDGLSGV--------EAALATADD---------------WTVERVA 256
                       A+ D   G+        +A  A + D               +TVE+ +
Sbjct: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344

Query: 257 EFCQLDSEDVACFYQWFADTD-KVVTLYSQGINQSSSGSDKCNAIINVHLFSGRIGRTGC 315
           E   +  + +    + +AD + KV++L++ G+NQ + G    + + N+HL +G+I   G 
Sbjct: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404

Query: 316 GPFSITGQPNAMG-GREVGGLANQLAAHMGF-SPQEVDRVGRFW--GSDRVAPMPGLMAV 371
            PFS+TGQP+A G  REVG  A++L A M   +P+      + W      +   PG  AV
Sbjct: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464

Query: 372 DLFRAIEAGQVKAVWIMGTNPVVSMPEADRVRQALLRCP--LVIVSDVMRHTDTADCAHV 429
              R ++ G +   W+   N + + P  +  R    R P   ++VSD    T TA  A +
Sbjct: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY-PTVTAQAADL 523

Query: 430 LLPALAWGEKDGTVTNSERRISRQRAFLPAPGEAKADWWILSQVAQRMGFGAAFDYRHPA 489
           +LP   W EK+G   N+ERR       +   GE+ +D W + + ++R      +    P 
Sbjct: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVW----PE 579

Query: 490 QIFREHAALSG-------FENQGQRAFNISALATLSDEQ--------------------- 521
           ++  +     G       F+N     F +S    L+D+                      
Sbjct: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639

Query: 522 ----------WRQLTPVQWPVTANA------GDGTGRLYSDGRCW----HPDGKARLLAI 561
                     + Q+  ++WPV           +G+      G  W     PDGKA +++ 
Sbjct: 640 HGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISS 699

Query: 562 TPQLPANPPSSAYPLVLNTGRVRDQWHTMTRTGKAPRLMRHLPEPYCDLHPQDALNAGVH 621
             + P   P+  Y L L TGRV + WHT T T + P L + +P+  C +H +DA   G+ 
Sbjct: 700 PYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLR 759

Query: 622 DGELVRISAASGWMLARAQVQRGQQ---RGSIFVPMHWNRQFSAQARADSLVAAVTDPYS 678
            G+ V IS + G +  R +  RG+    +G +FVP      F A+   + L+   TDP S
Sbjct: 760 RGDEVLISNSRGEVRVRVET-RGRNKPPKGLVFVPF-----FDARILVNKLILDATDPLS 813

Query: 679 GQPESKQARVRIQR 692
            Q + K+  V+I +
Sbjct: 814 KQTDFKKCPVKITK 827