Pairwise Alignments

Query, 882 a.a., nitrate reductase from Dickeya dianthicola ME23

Subject, 1428 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  314 bits (804), Expect = 3e-89
 Identities = 219/701 (31%), Positives = 348/701 (49%), Gaps = 35/701 (4%)

Query: 6    TTCPYCGVGCGVIATPQPD-GRVT-IEGDSRHPANLGRLCVKGSALGDTLDLQGRLLWPL 63
            T C YCGVGC +     P   R+  IEG+     N G LCVKG    D +    RL  PL
Sbjct: 740  TICTYCGVGCRLDLKIDPSTNRIRHIEGNKDSVVNQGMLCVKGRFGFDFIHSDKRLTTPL 799

Query: 64   ADGHR----VSWDQALGRVAQSLGDIIAQHGPQAVAFYGSGQLLTEDYYVANKLMKGFIG 119
               +      SW +A+  VA+ L +I  + G  A A   S +   ED +V  K ++  +G
Sbjct: 800  IRKNGKLQPCSWPEAIDYVAKRLTEIKQKDGSNAFASLASAKATNEDNFVLQKFVRSVLG 859

Query: 120  SANMDTNSRLCMASAVVGYKRALGADAVPCNYEDIEQADLVVLVGSNTAWAHPVVYQRLV 179
            + N+D  +RLC +S V G ++++G+ A+  +   I+ +D++ ++GS+T  AHP++  ++ 
Sbjct: 860  TNNIDHCARLCHSSTVTGLQQSIGSGAMTNDILSIKDSDVIFILGSDTTCAHPIIASKIQ 919

Query: 180  QAKQQRPHMRVVVIDPRHTATCDAAELHLPLAPGSDAGLFNGLLRWLAQRN-------AA 232
            QA       R++V DP+     + AEL++   PG+D  L N ++  + + N       A 
Sbjct: 920  QAVNLY-GARLIVADPKRVGIAEKAELYVAHRPGTDVMLLNAIMAEIIRNNWQDKDYIAK 978

Query: 233  LPDGLSGVEAALATADDWTVERVAEFCQLDSEDVACFYQWFADTDKVVTLYSQGINQSSS 292
              +G+  + A LA  +D+++E+ A    + +E++A   +      K    Y+ GI Q ++
Sbjct: 979  RTEGIEALYAELA-KEDYSLEKAALITGVKAENIARIARTIGTAQKTAVYYAMGITQHTT 1037

Query: 293  GSDKCNAIINVHLFSGRIGRTGCGPFSITGQPNAMGGREVGGLANQLAAHMGFSPQEVD- 351
            G D   AI N+ L  G IG +G G   + GQ N  G  ++G L N    +   +      
Sbjct: 1038 GHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDIHARM 1097

Query: 352  RVGRFWGSDRVAPMPGLMAVDLFRAIEAGQVKAVWIMGTNPVVSMPEADRVRQALLRCPL 411
            R    W +     + G+ A  +   I  G++ A+++MG NPV+S P+   V  AL +   
Sbjct: 1098 RFESHWQTPLSGEI-GVTATHMMHDIAKGKINALYVMGENPVLSDPDQAHVLNALSQIEF 1156

Query: 412  VIVSDVMRHTDTADCAHVLLPALAWGEKDGTVTNSERRISRQRAFLPAPGEAKADWWILS 471
            ++V D+   T+TA+ AHV+LPA A+ EK G  TN+ERR+ R    L +PGEA  DW I+ 
Sbjct: 1157 LVVQDIFL-TETAELAHVVLPAAAFVEKRGHFTNTERRVQRLEQALASPGEALPDWQIVQ 1215

Query: 472  QVAQRMGFGAAFDYRHPAQIFREHAALSGFENQGQRAFNISALATLSDEQWRQLTPVQWP 531
             +A  M  GA +DY+  A I+ E  AL+       R      L    D Q  Q   +QWP
Sbjct: 1216 AIANAM--GANWDYKDEAAIWAEINALT----PQYRGILWERLTAGEDGQIPQ--GIQWP 1267

Query: 532  VTANAGDGTGRLYSDGRCWHPDGKARLLAITPQLPANPPSSAYPLVLNTGRVRDQWHTMT 591
                   GT  ++         G      ++ +LPA  P + YPL L+TGR+ +Q+HT T
Sbjct: 1268 CPDEKHPGTPIMHQG---QFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRLLEQFHTGT 1324

Query: 592  RTGKAPRLMRHLPEPYCDLHPQDALNAGVHDGELVRISAASGWMLARAQVQRGQQRGSIF 651
             T K P L   L  P   +   DA   G+++G+ +R++   G +   A V +  Q G +F
Sbjct: 1325 LTRKTPGL-DLLGAPKVMISVYDAEQLGINNGDKIRLTTRRGEIEIDAFVTKRAQAGVLF 1383

Query: 652  VPMHWNRQFSAQARADSLVAAVTDPYSGQPESKQARVRIQR 692
            +P H+      +A A+ L     DP +  PE K   VR+++
Sbjct: 1384 LPFHF-----VEAAANKLTINALDPVAYIPEYKVCAVRVEK 1419