Pairwise Alignments

Query, 376 a.a., flagellar motor protein MotB from Dickeya dianthicola ME23

Subject, 360 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

 Score =  179 bits (454), Expect = 1e-49
 Identities = 132/388 (34%), Positives = 174/388 (44%), Gaps = 89/388 (22%)

Query: 6   PIIRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYFRT--- 62
           PII K+ K G  AHHGG+WK+AYADF+TAMMA FL++WL+   +  QL  I+ YF     
Sbjct: 5   PIIIKRIKKGGHAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFAPTAV 64

Query: 63  ----------------------------------PLKIAITSGPKISDASNPIPGGGSDP 88
                                             P       G   SDA+  +    SD 
Sbjct: 65  SQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDASDSDD 124

Query: 89  TQQEGDVK-------------------RQIDTMDGRLEEIKLNKLRERLDQLIDADPRLK 129
              +G+ K                   +Q+   + + ++ + NK    L Q I A P L+
Sbjct: 125 DAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKRQQEEFNKTATELRQAIQAVPSLQ 184

Query: 130 ALRPHLLIEMVDEGLRIQIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDIPNKISLS 189
           AL   LLI+   EGLRIQ+ID     MF TGS+ + P+  D+L  +A  + D+PNKIS+S
Sbjct: 185 ALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNKISIS 244

Query: 190 GHTDDAQYAMGERGYSNWELSAERANASRRELIIGGLAEGKVLRVVGMADTMNLKQAKGG 249
           GHTD   Y+    GY NWELSA+RA ASRR L+  GL E +V RVVG A+T  L  A   
Sbjct: 245 GHTDAPPYS-DPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPL-LADDP 302

Query: 250 SDAINRRISLVVLNKQAQENIERENAESSAINIDKIENLQNMGVDKSKPATAPADNGNST 309
               NRRI++ +L                               D+S  A   A  GN  
Sbjct: 303 KAPSNRRIAITLLR------------------------------DRSLYAEGAAGGGNGG 332

Query: 310 ATPPPETNGTPASGSTVAPAQAPATTAP 337
           A P    +G P   S +APA      AP
Sbjct: 333 AAPADPLSG-PKPPSILAPADGGPGAAP 359