Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

Subject, 228 a.a., Flagellar biosynthesis pathway, component FliR from Pseudomonas stutzeri RCH2

 Score =  117 bits (293), Expect = 2e-31
 Identities = 73/238 (30%), Positives = 127/238 (53%), Gaps = 37/238 (15%)

Query: 16  FFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPHTSIPVFSATGVWMLF 75
           ++WP  RI+A+ S AP+FN +AI+ RV+    +L+A+ +T                    
Sbjct: 13  YWWPFCRIMAVFSLAPMFNHKAISVRVR----ILLALALT-------------------- 48

Query: 76  QQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGG-PNMPVIARFMNLLAL 134
                 ++LG A+ L F    L G+++  Q+GLS A F DP  G  +  +I +   +L  
Sbjct: 49  ------LVLGLALLLVFTVFTLIGDVVSTQLGLSMAVFNDPMNGVSSASIIYQLYFILLA 102

Query: 135 LLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRIFSNGLMLALPLITLL 194
           LLF +++GHL  +S++  SF   PI +      +  T+A +   + S  L++ALP++  +
Sbjct: 103 LLFFAVDGHLVTVSIIYQSFVYWPIGSGLFYDGL-QTIAWSMAWVISAALLIALPIVFCM 161

Query: 195 LTINMALGLLSRLAPQLTIFAIGFPITLFAGITTVGFLVFLLSP-YAEKLFGETYDLL 251
             +    GLL+R++P + +F++GFP+ + AG++    L++L  P +AE     T DLL
Sbjct: 162 TLVQFCFGLLNRISPAMNLFSLGFPMAILAGLS----LIYLTLPNFAEAYLHLTRDLL 215