Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

Subject, 258 a.a., flagellar biosynthetic protein FliR from Pseudomonas stutzeri RCH2

 Score =  189 bits (480), Expect = 5e-53
 Identities = 98/230 (42%), Positives = 150/230 (65%), Gaps = 2/230 (0%)

Query: 1   MVTLSSIDMISWFNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPH 60
           M+ LS+  +  W  QF  PL RI AL+ + PI   + +  RV+L L + IA+V+ P++P 
Sbjct: 1   MLELSNAQIGGWVGQFLLPLFRIAALLMSMPIIGTQLVPVRVRLYLALAIALVLVPTLPP 60

Query: 61  TSI-PVFSATGVWMLFQQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGG 119
             +    S   + ++ +Q+LIGVMLGF +QL F    ++G+++ +QMGL FA+  DP+ G
Sbjct: 61  MPVVESLSLASLLLIAEQLLIGVMLGFVLQLFFHVFIVSGQMLAMQMGLGFASMVDPANG 120

Query: 120 PNMPVIARFMNLLALLLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRI 179
            ++PV+ +F N+L +LLFLS+NGHL ++ +L +SF T+P+    +S N F  +A   G +
Sbjct: 121 ISVPVLGQFFNMLVILLFLSVNGHLVVLEILAESFVTLPVGG-GLSTNHFWEVAGKLGWV 179

Query: 180 FSNGLMLALPLITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAGITTV 229
              GL+L LP IT LL +N+A GL++R APQL IF+IGFP+TL  G+  V
Sbjct: 180 LGAGLLLVLPAITALLVVNLAFGLMTRAAPQLNIFSIGFPLTLVLGLIIV 229