Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola ME23

Subject, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 4e-41
 Identities = 82/249 (32%), Positives = 138/249 (55%), Gaps = 2/249 (0%)

Query: 9   MISWFNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPH--TSIPVF 66
           ++ +   +FWP  RI A++    +   R +  RV+L LG+ +   V P+IP   + I + 
Sbjct: 8   VLDFIANYFWPYTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMPAIPAVPSDIALL 67

Query: 67  SATGVWMLFQQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGGPNMPVIA 126
           S  G  + F+Q++IGV +G   Q       + G+I+G+Q  L FA+  DP+ G N P++ 
Sbjct: 68  SLQGFMITFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLG 127

Query: 127 RFMNLLALLLFLSMNGHLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRIFSNGLML 186
           +   LLA L FL  +GHL +I L+V SF ++PI +  ++   F  LA   G +F   L +
Sbjct: 128 QLFMLLATLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAV 187

Query: 187 ALPLITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAGITTVGFLVFLLSPYAEKLFGE 246
           +L  I  LLT+N++ G+++R APQL IF++GF   L  G+    ++V  L  + +  + E
Sbjct: 188 SLSGIIALLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCWYIVHGLYTHYDIYWQE 247

Query: 247 TYDLLADLL 255
             + +  L+
Sbjct: 248 AEEQVCRLI 256