Pairwise Alignments

Query, 573 a.a., flagellar basal body M-ring protein FliF from Dickeya dianthicola ME23

Subject, 561 a.a., flagellar MS-ring protein (RefSeq) from Shewanella sp. ANA-3

 Score =  222 bits (565), Expect = 4e-62
 Identities = 166/570 (29%), Positives = 278/570 (48%), Gaps = 69/570 (12%)

Query: 27  RIPLLIASAATIAIVIALSLWARGPDYRVLYTNINERDGGSIVSELGKMNIPYRFTENGA 86
           +I +++A A  +A+ + + +WA+ P+YR L   +  ++   ++  L K  I Y+   +  
Sbjct: 34  QITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKNKIKYQIEVD-- 90

Query: 87  AIMIPSDKVYETRLKLAQQGLPKGGAVGFELLDQEK-FGISQFSEQINYQRALEGELART 145
            + +P DK  E ++ L++ G+    A   + L Q+  FG+SQ  EQ   + + E  LAR 
Sbjct: 91  VVKVPEDKYQEVKMMLSRAGVNSPAASTQDFLTQDSGFGVSQRMEQARLKHSQEENLARA 150

Query: 146 METLGPIHNARVHLAIPKPSLFVREQKSPSAAVTVTLQPGRALDDSQISAITYLVSSSVA 205
           +E L  +  A+V LA+PK ++F R    PSA V +  + G  L   ++ AI  +V+S+V 
Sbjct: 151 IEQLQSVSRAKVILALPKENVFARNTSQPSATVVINTRRG-GLGQGEVDAIVDIVASAVQ 209

Query: 206 GLPADKVTVVDQTGKLLTQNDSSGRDLNAS-QLKYANEVESNYQRRIEAILAPVVGAGNV 264
           GL   +VTV D  G+LL      G    A  +L+   + E+ Y+ +I++IL+P++G  N 
Sbjct: 210 GLEPSRVTVTDSNGRLLNSGSQDGISARARRELELVQQKEAEYRTKIDSILSPILGPDNF 269

Query: 265 HAQVTAQIDFASREQTDEQYQPNQTPNQAAVRSQQNSQSDQRGGPNVGGVPGALSNTPTP 324
            +QV   +DF + EQT +++ P+      ++RS+   +++  GG + GG+PGALSN P  
Sbjct: 270 TSQVDVSMDFTAVEQTAKRFNPDLP----SLRSEMTVENNSTGG-STGGIPGALSNQPPM 324

Query: 325 APTAPISTPPANNANNANNANNANNANANTTGTNTQTSAGNAANQTYNSRHDQTINYEVD 384
               P                       + T      +AGN       S  + T N+E+D
Sbjct: 325 ESNIP----------------------QDATKATESVTAGN-------SHREATRNFELD 355

Query: 385 RTIRHTKQNTGNIQRLSVAVVVNY---TQGEDGKPA--ALNDDQLKKIEALVRESMGFSS 439
            TI HT+Q  G ++R+SV+V V++     GE+G+ A  A  + +L  I  L+  ++GFS+
Sbjct: 356 TTISHTRQQIGVVRRVSVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSA 415

Query: 440 DRGDTLNVVNTPF---TITDATGGELPFWQKQAFFDLLTEAGRWLLVLIVGWILYRKLVR 496
            RGD L VV  PF    + D    EL  W+ Q +F    + G   LV++V   L   +VR
Sbjct: 416 QRGDVLEVVTVPFMDQLVEDVPAPEL--WE-QPWFWRAVKLGIGALVILV---LILAVVR 469

Query: 497 PQLQRRAQVQEAAEAAASLRGQD---------ADVTVTINSMEEELQRKSE-QRAHAEMH 546
           P L+R            S  G +         AD    +N+ E E     +       +H
Sbjct: 470 PMLKRLIYPDSVNMPEDSRLGNELAEIEDQYAADTLGMLNTKEAEYSYADDGSILIPNLH 529

Query: 547 S-----QRIRDLAENDPRVVALVIRHWMSN 571
                 + IR L  N+P +   V+++W+ +
Sbjct: 530 KDDDMIKAIRALVANEPELSTQVVKNWLQD 559