Pairwise Alignments

Query, 240 a.a., RNA polymerase sigma factor FliA from Dickeya dianthicola ME23

Subject, 696 a.a., Sigma 70 (RpoD) (NCBI) from Rhodospirillum rubrum S1H

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 8/198 (4%)

Query: 43  DLLQAGGIGLLSAVERYDSLQGTAFTTYAVQRIRGAMLDELRSRDWA---PRSVRRNARE 99
           DL+Q G IGL+ AV++++  +G  F+TYA   IR A+   +  +      P  +     +
Sbjct: 486 DLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINK 545

Query: 100 VAQAMQQAEQSLGRAPTEQEVAQTLNISLEEYRQILLDTNNSQLFSYDEWREEHGDSAEA 159
           + +  +Q    +GR PT +E+A+ L + LE+ R++L               EE     + 
Sbjct: 546 LVRTSRQMLHEIGREPTPEELAEKLQMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGD- 604

Query: 160 LLEGNEEANPLNQLMDVNLRQRVMDAIDNLPEREKMVLTLYYQEELN----LKEIGAVLE 215
            +E      PL+  ++ NLR+     + +L  RE+ VL + +   +N    L+E+G    
Sbjct: 605 FIEDKNAVQPLDAAINSNLRETCTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFS 664

Query: 216 VGESRVSQLHSQAIKRLR 233
           V   R+ Q+ ++A+++L+
Sbjct: 665 VTRERIRQIEAKALRKLK 682