Pairwise Alignments

Query, 173 a.a., 23S rRNA accumulation protein YceD from Dickeya dianthicola ME23

Subject, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 7e-46
 Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 2/174 (1%)

Query: 1   MQKVKLPLTLDAVRTAQKRLDYVGVYTAEQVMRVAGSVVSVDSDVNTMLSFNIDSQRLAV 60
           MQKVK+P T+D  + AQKRLD+ G+       R+  SV  V  D    LSF ID Q+L V
Sbjct: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60

Query: 61  IDGQADVTVTLLCQRCGKPFEHQVHATFCFSPVISDEQAEALPEAYEPIEVNEFGEVDLL 120
           I G+A++ V L CQRC + F H+    F ++P +  +  E  P+ Y+ +++NEFGEVDL+
Sbjct: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120

Query: 121 AMVEDELILSLPIAPVHDSEHCEVSETDMVFGQLPAEA--EKPNPFAVLASLKR 172
            +VEDE IL+LP   +HD   C V   ++VFG+LP E   EKPNPF VL SLK+
Sbjct: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174