Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Dickeya dianthicola ME23

Subject, 1177 a.a., transcription-repair-coupling factor from Marinobacter adhaerens HP15

 Score = 1177 bits (3046), Expect = 0.0
 Identities = 612/1153 (53%), Positives = 805/1153 (69%), Gaps = 25/1153 (2%)

Query: 10   PGKAGEQRLLGQLTGAACAVECAEIVERHAGLVVLITPDMQNALRLRDEIQQFTAQP--- 66
            P +  + R  GQL G++ A+   E    H GL ++IT    +A+RL   ++ F   P   
Sbjct: 20   PSRPADHRTWGQLHGSSEALAICESARAHKGLTLVITRSTADAIRLEQAMRFFLGLPPEE 79

Query: 67   -----------VMTLPDWETLPYDSFSPHQEIISARLSTLYQLPSLTRGVLILPVNTLMQ 115
                       +++LPDWETLPYD FSPHQ+IIS R+ TL++LP+ + GVL++P  TLM 
Sbjct: 80   DGPAVSDDGLELLSLPDWETLPYDLFSPHQDIISRRIRTLHRLPATSHGVLVVPARTLMH 139

Query: 116  KVCPHAFLHGHALMLKKGQRLSRDRLRNQLEQAGYRSVDQVMEHGEFATRGALLDLFPMG 175
            ++ P  +L G+ L+L+ GQ L  +  R QLE AGYR  + V EHGE+A RGA+LD+FPMG
Sbjct: 140  RLPPVNYLQGNTLLLEVGQSLDIESWRMQLEAAGYRHAENVYEHGEYAVRGAILDIFPMG 199

Query: 176  SEEPFRIDFFDDEIDSLRLFDADTQRTLNEVEQIHLLPAREFPTDKTAIELFRSQWREQF 235
            + +PFRID FDDEI++LR FD +TQR+++ +E+I LLPA EFP  K A   FRS+W EQF
Sbjct: 200  ASQPFRIDLFDDEIETLRTFDPETQRSIDRIERIELLPAFEFPWHKEARSGFRSRWFEQF 259

Query: 236  EVRRDAEHVYQQVSKGTLPAGIEYWQSLFFNQPLPALFSYLPTGTLLVNTGDIQQGADRF 295
                    +YQ V+ G  P GIEY+  LFF++    LF YLP  T +     +      F
Sbjct: 260  PDADKDTPIYQDVTHGITPPGIEYYLPLFFDETA-TLFDYLPGATHVFTADGLNDAVSHF 318

Query: 296  WQDIQQRHDSRRVDPMRPLLPPNALWLPVDTLFAELKQWPRVQLRSDTLPDKAANINLGY 355
              + + R++ RR D +RP+LPP  L+L  + LF +LK +PRV + ++T  D A ++N   
Sbjct: 319  DSETRNRYEDRRHDRLRPILPPKRLFLQQEELFGQLKAFPRVTVSAET-KDAAGSVNCPT 377

Query: 356  QPLPDLAVQHQNKSPLDALRRFVEQFGGQIVFSVESEGRRETLQEVLSRIKLSPAPVKSL 415
              LPD+A+  +   P   L+RF+ +F G ++   ES GRRE L E L    +    +   
Sbjct: 378  TTLPDIAMDGRAADPAGRLKRFLGEFDGHVLICAESSGRREALMENLGEQGVELKTLSGW 437

Query: 416  E---QTASPGCYLMIGASEHGFIDTLRQRTLICESDLLGERVSRRRQDSRRTINTDTLIR 472
            +           + I   E G +       LI E+ L GERV +RR+  + T   D   R
Sbjct: 438  QAFLDDKESSVAITIAPMEQGLVLPEHSVALITETALFGERVLQRRRREKPTETDDAGFR 497

Query: 473  NLAELRPGQPVVHLEHGVGRYAGLTTLEAGGIKAEYLILHYAGEDKLYVPVSSLHLISRY 532
            +L+ELR G PVVH++HGVGRY GL T+   G  +E+L+L YAG  KLYVPVSSLHLISRY
Sbjct: 498  DLSELRIGAPVVHIDHGVGRYLGLETITVEGEASEFLMLGYAGGSKLYVPVSSLHLISRY 557

Query: 533  AGGAEESAPLHKLGGDAWVRARQKAAEKVRDVAAELLDVYAQRAAHTGFAFKHDREQYQL 592
            AG   E APLHKLG D W  A+QKA EK+RD AAELLDVYA+R A  GF+F+  +E Y+ 
Sbjct: 558  AGNDTEHAPLHKLGTDRWSTAKQKALEKIRDTAAELLDVYARREARKGFSFEDPKEAYRA 617

Query: 593  FCQGFPFDTTPDQAQAINAVLSDMCRPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQV 652
            F  GFPF+ TPDQ  AI +V  DM     MDRLVCGDVGFGKTEVAMRAAFLA  + KQV
Sbjct: 618  FAAGFPFEETPDQQVAIQSVFEDMTSEQPMDRLVCGDVGFGKTEVAMRAAFLATWSGKQV 677

Query: 653  AVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSQKEQTQVLEQTQEGKVDILIGTHK 712
            AVLVPTTLLAQQH+++FRDRF++ PV++E+LSRFR+  + ++ LE  + G+ DI+IGTHK
Sbjct: 678  AVLVPTTLLAQQHYESFRDRFSDTPVQVELLSRFRTAGQTSKALEAVENGRADIVIGTHK 737

Query: 713  LLQSDVYWLDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGIRD 772
            LLQ D+ + +LGL+I+DEEHRFGV+ KER+KA+RA VD+L LTATPIPRTLNMAM  +RD
Sbjct: 738  LLQGDIKFKNLGLVIIDEEHRFGVQQKERLKALRAEVDMLNLTATPIPRTLNMAMGHLRD 797

Query: 773  LSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIEKAAQQLNEL 832
            LSIIATPPARRL+VKTFVR+ D+ +V+EAILREILRGGQVY+L+NDV  IEK A+ L  L
Sbjct: 798  LSIIATPPARRLSVKTFVRQKDNAMVKEAILREILRGGQVYFLHNDVATIEKTAEDLRSL 857

Query: 833  VPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHFG 892
            +PEAR+ + HGQMRERDLE++M+DF+H+RFNVLVCTTIIETGID+PSANTIIIERAD FG
Sbjct: 858  IPEARVGVAHGQMRERDLEKIMSDFYHKRFNVLVCTTIIETGIDVPSANTIIIERADKFG 917

Query: 893  LAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSNDAHKRLEAIASLEDLGAGFALATHDLEI 952
            LAQLHQLRGRVGRSHHQAYAYLLTP PK+++ DA KRL+AI+  +DLGAGF LATHDLEI
Sbjct: 918  LAQLHQLRGRVGRSHHQAYAYLLTPPPKSITADAKKRLDAISEAQDLGAGFMLATHDLEI 977

Query: 953  RGAGELLGEGQSGQMESVGFSLYMDLLESAVESLKAGREPSLEDLISGQTDVELRLPALL 1012
            RGAGELLGE QSGQ+ES+GF+LYM LL+ AV++++ GR P+ +  +S  T++ LR+PAL+
Sbjct: 978  RGAGELLGEEQSGQIESIGFTLYMQLLDEAVKAIREGRTPNADLPLSHGTEMNLRIPALI 1037

Query: 1013 PDDFIPDVNTRLSFYKRIASAKNDNELDDLKAELIDRFGKLPDAARHLLQVAGLRQQAQT 1072
            P+D++PDV+ RL  YKRIAS  +   L +L+ E+IDRFG LPD A++L++   LR +A+ 
Sbjct: 1038 PEDYLPDVHNRLMLYKRIASVDSPEALKELQVEMIDRFGLLPDPAKNLIRQTELRLRAEA 1097

Query: 1073 LGIKRIEGNDKGGFVEFSQHNRVDPTHLIGLLQRDPKIYRLDGPSRLKF-IKD--LGGYP 1129
            LGI +++   +   +EF     VDP  L+  +Q  P  YRL+G +  +F +KD   GG  
Sbjct: 1098 LGIVKVDAGKEWARLEFGSSTPVDPLVLVKKVQSAPDQYRLEGANSFRFRLKDATTGG-- 1155

Query: 1130 QRLTFITTLLEEM 1142
             +L  I+ +L E+
Sbjct: 1156 -KLDGISRMLGEL 1167