Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Dickeya dianthicola ME23

Subject, 1148 a.a., transcription-repair coupling factor from Klebsiella michiganensis M5al

 Score = 1829 bits (4737), Expect = 0.0
 Identities = 904/1148 (78%), Positives = 1022/1148 (89%)

Query: 1    MPEQYRYTLPGKAGEQRLLGQLTGAACAVECAEIVERHAGLVVLITPDMQNALRLRDEIQ 60
            MPEQYRY+LP KAG+QR LG+LTGAACA   AE+ ERH G VVLI PDMQNALRL DEI+
Sbjct: 1    MPEQYRYSLPVKAGDQRQLGELTGAACATLVAEMAERHGGPVVLIAPDMQNALRLNDEIR 60

Query: 61   QFTAQPVMTLPDWETLPYDSFSPHQEIISARLSTLYQLPSLTRGVLILPVNTLMQKVCPH 120
            QFT   V  L DWETLPYDSFSPHQ+IIS+RL+TLYQLP++ RGVLI+PV+TLMQ+VCPH
Sbjct: 61   QFTDSMVAGLADWETLPYDSFSPHQDIISSRLATLYQLPTMERGVLIIPVSTLMQRVCPH 120

Query: 121  AFLHGHALMLKKGQRLSRDRLRNQLEQAGYRSVDQVMEHGEFATRGALLDLFPMGSEEPF 180
             FLHGHAL++KKGQRLSRD LR QL+ AGYR VDQVMEHGE+ATRGALLDLFPMGSE+P+
Sbjct: 121  NFLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPY 180

Query: 181  RIDFFDDEIDSLRLFDADTQRTLNEVEQIHLLPAREFPTDKTAIELFRSQWREQFEVRRD 240
            R+DFFDDEIDSLRLFD D+QRTL EV  I+LLPA EFPTD+ AIELFRSQWR++FEV+RD
Sbjct: 181  RLDFFDDEIDSLRLFDVDSQRTLEEVASINLLPAHEFPTDQAAIELFRSQWRDRFEVKRD 240

Query: 241  AEHVYQQVSKGTLPAGIEYWQSLFFNQPLPALFSYLPTGTLLVNTGDIQQGADRFWQDIQ 300
            AEH+YQQVSKGTLPAGIEYWQ LFFN+PLP LFSY P  TL+VNTGD++  A+RF  + +
Sbjct: 241  AEHIYQQVSKGTLPAGIEYWQPLFFNEPLPPLFSYFPAKTLIVNTGDLEASAERFQNETR 300

Query: 301  QRHDSRRVDPMRPLLPPNALWLPVDTLFAELKQWPRVQLRSDTLPDKAANINLGYQPLPD 360
             R ++R VDPMRPLLP   LWL  D LF+ELK+WPRVQL+++ L +KAAN NLGYQ L +
Sbjct: 301  ARFENRGVDPMRPLLPTEQLWLRSDELFSELKKWPRVQLKTERLAEKAANTNLGYQKLHE 360

Query: 361  LAVQHQNKSPLDALRRFVEQFGGQIVFSVESEGRRETLQEVLSRIKLSPAPVKSLEQTAS 420
            LA+Q QNK+PLD LRRF+E F G ++FSVESEGRRE L E+L+RIK++P  +  LE+  +
Sbjct: 361  LAIQAQNKAPLDNLRRFLESFSGPVIFSVESEGRREALGEMLARIKIAPKHILRLEEATA 420

Query: 421  PGCYLMIGASEHGFIDTLRQRTLICESDLLGERVSRRRQDSRRTINTDTLIRNLAELRPG 480
             G YLMIGA+EHGFID+ R   LICESDLLGERV+RRRQDSRRTIN DTLIRNLAEL  G
Sbjct: 421  NGRYLMIGAAEHGFIDSQRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIG 480

Query: 481  QPVVHLEHGVGRYAGLTTLEAGGIKAEYLILHYAGEDKLYVPVSSLHLISRYAGGAEESA 540
            QPVVHLEHGVGRYAG+TTLEAGGI  EYL+L YA + KLYVPVSSLHLISRYAGGAEE+A
Sbjct: 481  QPVVHLEHGVGRYAGMTTLEAGGINGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA 540

Query: 541  PLHKLGGDAWVRARQKAAEKVRDVAAELLDVYAQRAAHTGFAFKHDREQYQLFCQGFPFD 600
            PLHKLGGDAW RARQKAAEKVRDVAAELLD+YAQRAA  G+AFKHD+EQYQLFC GFPF+
Sbjct: 541  PLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKAGYAFKHDKEQYQLFCDGFPFE 600

Query: 601  TTPDQAQAINAVLSDMCRPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTL 660
            TTPDQAQAINAVLSDMC+PLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTL
Sbjct: 601  TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTL 660

Query: 661  LAQQHFDNFRDRFANWPVRIEMLSRFRSQKEQTQVLEQTQEGKVDILIGTHKLLQSDVYW 720
            LAQQHFDNFRDRFANWPVRIEMLSRFRS KEQ Q+LEQ  EGK+DILIGTHKLLQ DV  
Sbjct: 661  LAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQVAEGKIDILIGTHKLLQPDVKL 720

Query: 721  LDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGIRDLSIIATPP 780
             DLGLLIVDEEHRFGVRHKERIKAMRA+VDILTLTATPIPRTLNMAMSG+RDLSIIATPP
Sbjct: 721  RDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPP 780

Query: 781  ARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIEKAAQQLNELVPEARIAI 840
            ARRLAVKTFVREYD+LVVREAILRE+LRGGQVYYLYNDVENI+KAA++L ELVPEARIAI
Sbjct: 781  ARRLAVKTFVREYDALVVREAILREVLRGGQVYYLYNDVENIQKAAERLAELVPEARIAI 840

Query: 841  GHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHFGLAQLHQLR 900
            GHGQMRER+LERVMNDFHHQRFNVLVCTTIIETGIDIP+ANTIIIERADHFGLAQLHQLR
Sbjct: 841  GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR 900

Query: 901  GRVGRSHHQAYAYLLTPNPKAMSNDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLG 960
            GRVGRSHHQAYA+LLTP+PKAM+ DA KRLEAIASLEDLGAGFALATHDLEIRGAGELLG
Sbjct: 901  GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG 960

Query: 961  EGQSGQMESVGFSLYMDLLESAVESLKAGREPSLEDLISGQTDVELRLPALLPDDFIPDV 1020
            E QSG ME++GFSLYM+LLE+AV++LKAGREPSLEDL S QT+VELR+P+LLPDDFIPDV
Sbjct: 961  EDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV 1020

Query: 1021 NTRLSFYKRIASAKNDNELDDLKAELIDRFGKLPDAARHLLQVAGLRQQAQTLGIKRIEG 1080
            NTRLSFYKR+ASAKN+NEL+++K ELIDRFG LPD AR+LL +A LRQQAQ LGI+++E 
Sbjct: 1021 NTRLSFYKRVASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLES 1080

Query: 1081 NDKGGFVEFSQHNRVDPTHLIGLLQRDPKIYRLDGPSRLKFIKDLGGYPQRLTFITTLLE 1140
            N+KGG +EF++ N V+P  LI LLQ+ P+ YRLDGP+RLKF++DL     R+ ++   + 
Sbjct: 1081 NEKGGTIEFNEKNNVNPVWLISLLQKQPQHYRLDGPTRLKFMQDLAERKTRMEWVRQFMR 1140

Query: 1141 EMAQHTCA 1148
            ++ ++  A
Sbjct: 1141 QLEENATA 1148