Pairwise Alignments

Query, 376 a.a., porin from Dickeya dianthicola ME23

Subject, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 96/404 (23%), Positives = 148/404 (36%), Gaps = 91/404 (22%)

Query: 1   MKRNVLAVVIPALLAAGAANA-----------AEVYNKDGNKLDLTGKIEAAHYFGNESG 49
           M + ++A+ + A   A  A A           + VY+  G  L++ G+ EA      + G
Sbjct: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEAR--LSLKDG 67

Query: 50  NSSYFGDGDQTFTRLGFKGETKINNDLTGYARFEYQFDASNAEDSNSLPNSNTGSKTRYA 109
            +      D +  RL F G+ +IN+ L G   +E +F  +N +  N+   SN     RY 
Sbjct: 68  KAQ-----DNSRVRLNFLGKAEINDSLYGVGFYEGEF-TTNDQGKNA---SNNSLDNRYT 118

Query: 110 YAGLKFGDFGSLDYGRNRAVGYDGISYTDVLPEQGGDSSYTDNLTGRNAGVATYRNKNFF 169
           YAG+  G +G + YG+N         +TD++       SY  N       VA        
Sbjct: 119 YAGIG-GTYGEVTYGKNDGALGVITDFTDIM-------SYHGNTAAEKIAVA-------- 162

Query: 170 GLVDGWDFALGYQAKHEDSSQLRKQTGDGWAISSSYTSPIGVGVIASYTGADRTTTDSSG 229
              D  D  L Y+ +  D                       +GV ASY  ADR   D+ G
Sbjct: 163 ---DRVDNMLAYKGQFGD-----------------------LGVKASYRFADRNAVDAMG 196

Query: 230 SGAARQTA--------DGRGAKA------EAWATGLKY---DANNVYVAATYGEFHNLTY 272
           +      A        DG    A        +  G  Y   D  N Y+ A      NL +
Sbjct: 197 NVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQNEYMLAASYRMENLYF 256

Query: 273 TGSRATNALDKTKVFEAVAQYTLDFGLTPSIGYVSSKAEDNGAGGLSSKTNGYVTKYVSL 332
            G      L K         YT   G   + GY   +A        +           ++
Sbjct: 257 AGLFTDGELAKD------VDYT---GYELAAGYKLGQAAFTATYNNAETAKETSADNFAI 307

Query: 333 GSTYAFNKNFSTFVEYDINLIDNDNNPYNRSTGNTVAVGAIYQF 376
            +TY F  NF +++ Y  NL+D+D      ++ + +A+G  Y F
Sbjct: 308 DATYYFKPNFRSYISYQFNLLDSD-KVGKVASEDELAIGLRYDF 350