Pairwise Alignments

Query, 1168 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola ME23

Subject, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

 Score =  637 bits (1642), Expect = 0.0
 Identities = 455/1201 (37%), Positives = 634/1201 (52%), Gaps = 130/1201 (10%)

Query: 14   HSNHPEALRNVLVSWMAANPLGG-LENELILVQSNGIGQWLKLALARDTRDGGCGVAAAL 72
            HSN  E L+ +LV  +   PL      E ILVQS G+ QWLK+ALA +      GVAA L
Sbjct: 6    HSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASEL-----GVAANL 60

Query: 73   DIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLTQPEFAALARFLHQD 132
            +  LP+ F WQ++  VL +  VP+ S F+K  + WRL+ LLP+LL + EF  L R+L  D
Sbjct: 61   EFPLPATFIWQMFTQVLPD--VPQRSAFNKEAMSWRLMELLPKLLDRTEFQPLQRYLQDD 118

Query: 133  TDLRKHYQLAERLADLFDQYQVYRADWLAQWAAGDDVLATSRRGVEPLPEDQRWQPLLWR 192
             D  K +QLAE++AD+FD Y VYR DW+  W AG+DV+         + +   WQP+LWR
Sbjct: 119  EDDSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVE--------IADQHPWQPILWR 170

Query: 193  ALLRDTG-EALSGTSRAALHRRFLDEVQRRGDADRPAGLPSRVMVFGISSLPQQALELLA 251
             L   T  +  S   RA L++RF++++   GD DR    P R+ +FGIS+LP + ++ L 
Sbjct: 171  ELYAYTHKQGHSIYHRANLYQRFIEQLAS-GDFDRSTW-PKRLFIFGISALPPRYIDALR 228

Query: 252  AIGRWIQIFMCVHNPCEHYWGNIIADKDLLRAERARQQRK------------------PG 293
            A+G  I + + + NPC+HYWG+I   K L R   A Q+RK                   G
Sbjct: 229  AMGEHIDVHLMLTNPCQHYWGDIRDRKYLARV--AAQKRKILQINGEQVTIGSEVSPLKG 286

Query: 294  MPEVIALEELH-QHA--HPLLAAWGKQGRDYIGLLDEYDQREQYEPLLQPLISRIDLFDS 350
              E    E +H  HA  + LLA+ GK GRD + LL + DQ E            ++LF  
Sbjct: 287  DVENYLQESMHLSHAVGNSLLASMGKMGRDNLYLLAQNDQSE------------LELFIE 334

Query: 351  NGEDCLLNQLQEDIRDLRPLTE-----SRARWPAIDPYQDSSIRFHVAHSAQREVEVLHD 405
               D LL+ +Q DI  L+   +     S    P+I   QD S++  + HS  REVEVLHD
Sbjct: 335  IQRDSLLHHIQADILHLQEHQDDAKFASSGHKPSIAA-QDDSLQIALCHSPIREVEVLHD 393

Query: 406  QLLAAFAADPTLRPRDVIVMVPDINGYAPHIQAVFGLIDRQDSRYIPFSVADRGPRQNNL 465
            +LLA F  DP+L+PRDVIVMVPDIN YAP+IQAVFG  +    R+IPFS++DR   Q + 
Sbjct: 394  RLLAEFERDPSLKPRDVIVMVPDINAYAPYIQAVFG--NAPGERFIPFSISDRSADQESP 451

Query: 466  LLAALERLLNLPQSRVAVSDVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHAR 525
            +L A  +LL LPQSR   S++L+LLE PA+  RFAI EE+    +RW+  A +RWGL++ 
Sbjct: 452  ILTAFLQLLALPQSRCLASELLELLETPAIMARFAIDEEEFATAKRWVEEAGIRWGLNSD 511

Query: 526  QRQSLDLPDAPEQNSWFFGLRRMLLGYAVGA-------GDAWRDIEPLDEIGGLDAVPAG 578
                 +LP A EQN+W FG+ RMLLGYA+ A       G  W  + P +++ G+ A  AG
Sbjct: 512  TGAEFELP-ASEQNTWQFGIERMLLGYAMPAEAGLYELGGQW--LAPYNQVQGMSAELAG 568

Query: 579  QLALLLDRLDYSWQQLCQPATPIQWGERLRALLNTFFAAD-EGEDGFMLLQLDEGLQNWL 637
            +LA  +  L     QL Q  +  QW   L  LL   F+ D +GE    L  + + L N  
Sbjct: 569  KLAHFVQTLSELRSQLAQTQSMEQWRYWLNELLERCFSVDLQGE--LALKTIRDSLVNLK 626

Query: 638  EACESVALEQALPLSVVREHWLGLFEQSSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGM 697
            +       +QA+  +++R+        + ++Q F AG V F TLMPMR+IPFR VCLLGM
Sbjct: 627  QQLADAGYQQAVSPAIIRQVLTNKLSGTRISQRFLAGQVNFCTLMPMRSIPFRRVCLLGM 686

Query: 698  NDGDYPRNRVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYLSWVGRSIHDNS 757
            NDG YP N +   FDL     R GDRSRRE+ RYLFLEALLSA+E+LY+S+VGRSI DNS
Sbjct: 687  NDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRYLFLEALLSAKEQLYISYVGRSIQDNS 746

Query: 758  ERPPSVLVAQLRDHLSNGWRTA---------DGQDVLPALTVEHRLQPFSPDYFTAGSPL 808
            ER PSVLV++L ++    +  A          G+ ++  LT ++ + PFSP  F AG   
Sbjct: 747  ERVPSVLVSELLEYCEQNYCLAGDENLESDDSGRRLVEHLTTQYPMVPFSPQAFIAG--- 803

Query: 809  FSYAREW-----RAGLLPQDGLLPQHAPATDAALDEYRQDGVLTLRQLADFARDPVRSFF 863
             S+AREW     R G    D L     P +D  L E      L L +L  F R PV  FF
Sbjct: 804  -SFAREWLPAARRQGQSSADFL----TPLSDYLL-EVSWPMELDLVELQRFWRLPVEYFF 857

Query: 864  RLRLNVWFEQEDATSQDQEPFAIDALENWRLQHELIQVQKAALHQRIPREQALTEQLARI 923
            + RL V FE   A  +D EPFA+D L  ++L+ EL++    A      R+Q + +   + 
Sbjct: 858  KRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVE-NLLACRDGAERDQVVAQFAKQQ 916

Query: 924  ARRGELAPGGFTAVLEQDLAEPMADLFTRYEQERETWPEPAPDEPLSLPDLPLEDWLNEL 983
              +G+L    F    + +LA+         E+      +P  DE + L   P +D    L
Sbjct: 917  RAQGKLPVAAFG---DLELAQSAQQALALAEKIGFLCHQPLEDEEIDLRLQPFDDGREVL 973

Query: 984  RTDGQGNRCRLVLESGGLLHPTRRSYRLDKLVPFWVAHLAGHLGGQPLHSTLVS---KNG 1040
                   R +      GL+     + R + L+  W+ HL     G+ + + L+    K G
Sbjct: 974  LRGWLVKRYQ-----SGLVRARSGAIRSEDLLAAWIDHLCLAASGKAVTTHLIGYERKEG 1028

Query: 1041 TVY--LPAL-EPEQAKAYWQTLVEAWREGMRYPLPLAVKTGFRWLEAG---GEPEQPPDG 1094
              +  LP L + +QAK     LV  + +GM  PL    KT    +EAG   G+ ++  + 
Sbjct: 1029 VQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPKTALACVEAGFSRGKWQEDEEK 1088

Query: 1095 EAGKAARQCYEEHDPANRKF--AESASNAYLARAFPNFDQLWANGEFARWAQLLLAPLYQ 1152
               K A       D  N  F       N Y+AR +P     W++ E A+  + L   + Q
Sbjct: 1089 SYKKMA-------DTFNDSFYIKGEGGNRYIARIWPQ----WSD-ELAKTLRQLAIKVLQ 1136

Query: 1153 T 1153
            T
Sbjct: 1137 T 1137