Pairwise Alignments

Query, 1236 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola ME23

Subject, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  742 bits (1916), Expect = 0.0
 Identities = 500/1253 (39%), Positives = 684/1253 (54%), Gaps = 91/1253 (7%)

Query: 3    AHSLPSPLDVLRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHG-GEQAFSRPLNPPEI 61
            ++ L   LD LRFPL G+RLIEASAGTGKT+TIA LY+RLVLGHG  E   + PL+  +I
Sbjct: 5    SNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQI 64

Query: 62   LVVTFTDAATRELRDRIRARLAQAAGYFQPDGKDGKDGKDDKDDKDDEADPLLRALRADY 121
            LVVTFT+AAT ELRDRIR RL  A   F     D               DPLLR+L A++
Sbjct: 65   LVVTFTEAATAELRDRIRRRLHDARLAFARGASD---------------DPLLRSLLAEF 109

Query: 122  PPEQWPACARKLQLAAE-WMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLL 180
                    A  L L+AE  MDEAA+ TIHG+C RML ++AF+SGS F     TD+S +  
Sbjct: 110  TDHN---LAVSLLLSAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKA 166

Query: 181  EVVRDYWRTFFFPLDARDVLELRDSWSSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVR 240
            +VV DYWR  F+PL      E+R  W +P      +   L          L     +A++
Sbjct: 167  QVVADYWRRQFYPLPISLASEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQ 226

Query: 241  EEKTRQLTALKAPWPQWCGELRDLLNAAVAQKKADGRKLQARYFEAWLDKLQHWAASDET 300
            + +  ++  +K  W     E+   +  +   K +    L+       L  L  WA S+  
Sbjct: 227  QAQIARICEIKQHWLVEREEIEPAVTGSDLHKNSQNALLRR------LPILDAWAQSETH 280

Query: 301  TLDIGTGWTRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRSQLLRHACRWV 360
             L + +     T  GL    K  +  P  P L   E ++  L++    ++ LL HA    
Sbjct: 281  DLHVPSELEEFTQSGLLA--KSKKGNP--PQLALFERIEAFLAEPVSLKTPLLVHAIHHC 336

Query: 361  SQRFRHEQESRAQMGFQDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYR 420
                   + +   + F DLLT+L AAL  D    L +RIR  +PVAMIDEFQDTDPLQY 
Sbjct: 337  RHWLAKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYS 396

Query: 421  IFDTLYRVADNDPQQGLILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQ 480
            IF  LY    + PQ GL++IGDPKQAIYAFRGADI+TY++AR   +  HYTLGTN+RS+ 
Sbjct: 397  IFSRLYL---DYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNA-HYTLGTNWRSSA 452

Query: 481  AMVGAVNQVFMQAENRADGAGAFLFRQPDGGNPVPFLPVQAN-GRDEA-WILEGAAAAAL 538
            AMV AVNQVF  A +       F++      + +PF PV A+ G D+  W LEG    AL
Sbjct: 453  AMVAAVNQVFSSATH------PFIY-----SDDIPFQPVAASPGADKRHWSLEGQVQPAL 501

Query: 539  TCWTLAT-DQPLSSAEYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAV 597
            T W     D+P S  +Y  +MA  CA ++  +L     G A F   G+A   +  GD+AV
Sbjct: 502  TYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAATFH-RGEA---IEAGDLAV 557

Query: 598  LVNTGREAMAVRAQLSARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAAL 657
            LV TG EA  VR  LS +G+ SVYLS+R+SVF S  A ++   L A   PE++RLLRAA+
Sbjct: 558  LVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAV 617

Query: 658  ATPLLGLSWQALDRLNHDEQEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFDVPRRLLA 717
            A+ L  L+   LD LN+DE EWE+ + +F +Y+  W ++GVLPMLR ++ +  +  R LA
Sbjct: 618  ASNLFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLA 677

Query: 718  -ADNARALTDVLHLSELLQQASVHLDGEHALIRYLAEQCQADNP----GGDTLKLRLESD 772
             ++  R LTD LH+SELLQQA+  +D +  L+R+L  Q  AD      G D    RLES+
Sbjct: 678  ESEGERWLTDYLHISELLQQATREIDSDQGLLRFLT-QAMADAAQGLGGSDEQIQRLESE 736

Query: 773  ADLVKVVTVHKSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDDDGQPR-LELTASDEAVQ 831
              LV++VT+HKSKGLEYPLVFLPF  ++R  ++     KY+D +     ++LT ++EA+ 
Sbjct: 737  RRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEG----KYYDAESATTWVDLTGNEEALA 792

Query: 832  RADHERLGEDLRKFYVALTRARYALWLGMAPLKE---------LEKSAPGYLLGAGEPLE 882
            +AD ERL EDLR  YVALTRA Y  ++G+APL+            +SA G+LL  G+   
Sbjct: 793  KADQERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSAMGFLLQDGQEGG 852

Query: 883  PAQLAQPLSAWCGAHSRMA--PLPETDDEVYRAELNTPALGQEPPLPDMRRHRWRITSYS 940
             A L Q L   C     +   P P+  ++ Y+             L      RWR+TSYS
Sbjct: 853  IADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQAIDRRWRVTSYS 912

Query: 941  GLQLAPEGHYREFREPSAGDVPEVQSAQQETFSEPQAFAEHLPPLPAGLDMYSFPRGAAP 1000
            GL +         R     ++P ++    +  S  +     L  +   +  ++FPRGA P
Sbjct: 913  GLVMQSS----HARHDPLQELPLLEVGGFDLDSAQERDGAALESVERSI--FNFPRGARP 966

Query: 1001 GSFLHGLLEWAGKEGFAALAAERHRVEDQVARRCNRQGWTQWIPMLTDWLMALLSQPLAL 1060
            G+FLH L E   +  F   A      +  +    + Q  ++W+P+L   +  +LS PL  
Sbjct: 967  GTFLHSLFE---EVDFQQSAHSEPNTKIILELMESEQIESEWLPVLQQLVDTVLSTPL-- 1021

Query: 1061 PTSPGSAVSLAGLTQYQ--VEMEFWFALSQVDTQVLDQQVSAATLAGEPRAVLMREQLNG 1118
                G A+ L  +   Q   E+EF   +  +D   L++              L    + G
Sbjct: 1022 ---DGKALRLQQIMAAQRLTELEFLLPIEVLDAPTLNRITQRHDPLSAHAGDLGFHAVQG 1078

Query: 1119 MLKGFIDLVFEHQGRYYVLDYKSNWLGADAADYDPPRMARAMLDHRYDLQLALYLFALHR 1178
            MLKGFIDLVF++QGRYYVLD+KSN LG D A Y P R+  AM +HRYDLQ  +Y  ALHR
Sbjct: 1079 MLKGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHR 1138

Query: 1179 LLKSRLPDYDYDRHVGGALYLFLRSSQAPGG-GVFAQRPDWALMEALERLFSG 1230
             L+SRL  Y+Y++H GG  YLFLR     G  GVF  +P  AL++ L+ L +G
Sbjct: 1139 FLRSRLAHYNYEQHFGGVFYLFLRGMDGRGDQGVFHTKPSLALLDELDGLIAG 1191