Pairwise Alignments

Query, 1236 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola ME23

Subject, 1189 a.a., ATP-dependent nuclease/helicase from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 1e-30
 Identities = 231/931 (24%), Positives = 355/931 (38%), Gaps = 167/931 (17%)

Query: 18  AGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPEILVVTFTDAATRELRDR 77
           A S  + A+AG+GKT  +    +RL+L             P  IL +T+T AA  E+ +R
Sbjct: 31  ACSAWVSANAGSGKTHVLTQRVIRLLLAG---------CRPSAILCLTYTKAAASEMSNR 81

Query: 78  IRARLAQAAGYFQPDGKDGKDGKDDKDDKDDEADPLLRALRADYPPEQWPACARKL-QLA 136
           +  +LA+ A                    D   +  + A+    PP      AR+L   A
Sbjct: 82  VFEKLAEWATL-----------------DDTTLEKRIEAIEGKRPPTAKIQEARRLFARA 124

Query: 137 AEWMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFFFPLDA 196
            E      + TIH +C  +L +   ++    + ++  D++  +L              DA
Sbjct: 125 LETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAVLLA------------DA 172

Query: 197 RDVLELRDSWSSPEHFYRSVTPLLEYADEIGIDDL---------PAQIF----------- 236
           R  L    + +S      +   +L+ AD+ G++ L         P Q F           
Sbjct: 173 RRALLTATAAASDGELAEAFATVLDLADDTGLEKLLAAIVANRAPIQAFLDHASGRGGME 232

Query: 237 -----SAVREEKTRQLTALKAPWPQWCGELRDLLNAAVAQKKADGRKLQARYFEAWLDKL 291
                +   E      T + A WP     L  L   A+      G +L      A  D L
Sbjct: 233 AHLRAALGLEPGETAGTVMAAVWP-----LAGLNGPALDDYIDLGLRLGGAKPSAIADGL 287

Query: 292 QHWAASDETTLDIGTGWTRLTPQGLRECWKVPEETPQHPALTAMEALQQQLSDLPEPRSQ 351
           +   A D    D  T +++L         K   E+    A     A Q +L  + E RS 
Sbjct: 288 RAVRAID----DAATRYSKLVELFFNGGGKPKAESAFLNAAMRRAAPQLELR-VEEARSH 342

Query: 352 LLR--------------HACRWVSQRFRHEQES----RAQMGFQDLLTRLDAAL-RGDNG 392
           +L                A   +++R   + E+    R+Q+ F+DL+ R  A L R D G
Sbjct: 343 MLACVDRLSIVQMYGATRAALVLAERLNRDYEALKKARSQLDFEDLIHRTAALLARSDVG 402

Query: 393 ERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYRVAD-------NDPQQGLILIGDPKQ 445
             +  ++ +     ++DE QDT P Q+ I  +L   AD           + +  +GD KQ
Sbjct: 403 AWVHYKLDQGIDHILVDEAQDTSPAQWTIIQSL--AADFFAGETARADDRTIFAVGDEKQ 460

Query: 446 AIYAFRGADIYTYLRARRDTDGR------HYT---LGTNFRSTQAMVGAVNQVFMQAENR 496
           +IY+F+GA    + R    T+ R      H++   L  +FRST  ++ AV+ VF    N 
Sbjct: 461 SIYSFQGARPERFSRESTLTERRVRAGNKHFSPIRLQLSFRSTVDVLSAVDTVFANPGN- 519

Query: 497 ADGAGAFLFRQPDGGNPVPFLPVQANGRDEAW-ILEGAAAAALTCWTLATDQPLSSAEYR 555
           A G  A         N +        G  + W ++    AA+   WT   D     A   
Sbjct: 520 ARGLSARSEAIVHASNRIG-----QPGAVDLWDVIAPEPAASEEDWTAPFDATPERAPVN 574

Query: 556 QRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAM--AVRAQLS 613
                  AR +  +L+    GR      G   R +RPGD+ VLV   R+A   A+   L 
Sbjct: 575 I-----LARRIAAVLE-DWIGRETVIEKG-VRRAMRPGDVIVLVRK-RDAFVNALTRALK 626

Query: 614 ARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALATPLLGLS----WQAL 669
            RG   V  +DR  +       +L         PE+D  L A L +PLL L     ++  
Sbjct: 627 RRGNIPVAGADRLVLTSHIAVQDLIALGRFVLLPEDDLSLAALLKSPLLDLGEEDVFELA 686

Query: 670 DRLNHDEQEWERR----VMQFVRYQSCWRQQGVLPMLRRLMWEFDVPRRLLAADNARA-- 723
            R    E  W R       +  RY    R       L R +   D   R+L AD  R   
Sbjct: 687 ARRTEGESLWRRLRQAGAEETSRYHEAVRTLSRYSGLARELLPHDFYARVLGADGGRRAF 746

Query: 724 -------LTDVLH--LSELLQQASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDAD 774
                  ++D+L   L+  L      L G  A I  L  +         T+K   + + D
Sbjct: 747 LARLGSEVSDILDEFLTFALDHERNGLPGLQAFISTLEIEAP-------TVKREQDKERD 799

Query: 775 LVKVVTVHKSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDDDGQPRLELT--------AS 826
            V+V+TVH +KGLE P+VFL        V Q+   L++ +        LT        ++
Sbjct: 800 EVRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRFLEKAQVDHSTLTVPVWRAPGSA 859

Query: 827 DEAVQRADHERL-----GEDLRKFYVALTRA 852
             ++  AD+ERL      E  R  YV +TRA
Sbjct: 860 PNSLIAADNERLKKLAEEEYRRLLYVGMTRA 890