Pairwise Alignments

Query, 1236 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola ME23

Subject, 1187 a.a., UvrD/REP helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 5e-27
 Identities = 239/948 (25%), Positives = 370/948 (39%), Gaps = 174/948 (18%)

Query: 16  PLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPEILVVTFTDAATRELR 75
           PLA S  + ASAGTGKT  +    +RL+L             P  +L +TFT AA  E+ 
Sbjct: 30  PLA-SAWVAASAGTGKTKVLTDRVLRLLLA---------GTPPQRLLCLTFTKAAAAEMA 79

Query: 76  DRIRARLAQAAGYFQPDGKDGKDGKDDKDDKDDEADPLLRALRADYPPEQWPACARKLQL 135
           +R+ A L   AG+     +  +           E +  + AL             R  +L
Sbjct: 80  NRVSAVL---AGWATLPEEALRGRLASLLGSLPEGEEAIEAL-----------SGRARRL 125

Query: 136 AAEWMD---EAAVSTIHGWCNRMLGEHAFDSG-SLFNQTLETDQSDVLLEVVRDYWRTFF 191
            A+ +D      + TIHG+C  +L     ++G +   + L+  ++  L +  RD      
Sbjct: 126 FAQVLDCPGGLRIQTIHGFCQTLLRRFPLEAGVAPHFEVLDDREAQALHQSARD------ 179

Query: 192 FPLDARDVLELRDSWSSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVREEKTRQLTAL- 250
                R   +  D          ++  +  +  E   D    ++ +A+  ++ R L AL 
Sbjct: 180 --AVLRAARQAEDGEGGDPALAAALAVVTGHLSESRFD----EVMAALGGQRGRLLAALD 233

Query: 251 ------------------------KAPWPQWCGELR---DLLNAAVAQKKADGRKLQARY 283
                                   +      C E       L AA A   A G+  Q R 
Sbjct: 234 HFGGAEALGKAIRDSLGLAADDTPETVLADGCAEGAFDGPSLRAAAAALIAGGKTDQERG 293

Query: 284 FEAWLDKLQHWAASDETTLDIGTGW-------TRLTPQGLRECWKVPEETPQHPALTAME 336
                 ++  + +  +  +  G  W       T+   + ++     P E      L ++E
Sbjct: 294 L-----RIAAFVSETDPAIREGLFWTYIGAFLTKTDEKPVKTLCTKPVEKAHPGTLESLE 348

Query: 337 ALQQQLSDLPE--------PRSQLLRHACRWVSQRFRHEQESRAQMGFQDLLTRLDAALR 388
           A QQ++  L E          S+ L      + + ++  + +  +M ++DL+      L 
Sbjct: 349 AEQQRIWTLRERLRAATTAQASEALLTLVGAMLKDYQRRKRALGRMDYEDLILAARRLLA 408

Query: 389 GDNGER-LAQRIRRQFPVAMIDEFQDTDPLQYRI-------FDTLYRVADNDPQQGLILI 440
           GD     +  ++       ++DE QDT P Q+ I       F T     D    + +  +
Sbjct: 409 GDGAAAWVLFKLDGGLDHLLVDEAQDTSPDQWAIASALAGEFFTDSARWDGTRPRTVFAV 468

Query: 441 GDPKQAIYAFRGADIYTYLRARR------DTDGRHYT---LGTNFRSTQAMVGAVNQVFM 491
           GD KQ+IY F+GAD   +   RR         G H+    L  +FRST+A++ AVN VF 
Sbjct: 469 GDRKQSIYGFQGADPKAFEDMRRHFHDAVSDIGGHFAEVPLNISFRSTRAVLEAVNAVFA 528

Query: 492 QAENRADGAGAFLFRQPDGGNPVP------FLPVQANGRDEAW-ILEGAAAAALTCWTLA 544
           +   R DG       Q D  + V            A G  E W  +E A       W   
Sbjct: 529 RQPAR-DGVA-----QDDADSGVAEDITHHAFRKDAGGLVELWPAMEPAPRVVGDPWKPP 582

Query: 545 TDQPLSSAEYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNT--G 602
            ++ +     R R+A   A + ++ +  GG+      +  Q  RP+RPGD+ VLV    G
Sbjct: 583 VER-IGLESARARLAKRVA-QRIKTMTSGGE-----LLESQG-RPIRPGDILVLVRRRGG 634

Query: 603 REAMAVRAQLSAR----GVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALA 658
            E   V A  SA+    GV  + L+D+ +V D    G+      A   PE+D  L + L 
Sbjct: 635 FEEELVSALKSAKVEVAGVDRMTLTDQLAVMDLIALGK------ALLLPEDDLTLASVLK 688

Query: 659 TPLLGLSWQALDRL----NHDEQEWERRVMQFVRYQSCWRQQGVLPMLR----RLM-WEF 709
            PL+GL   AL  L      DE+ W+R         +  +   ++  LR    RL   EF
Sbjct: 689 GPLIGLDEDALFTLARDRGRDERLWDRLRPHAGAENAYGKAMEIIEPLRDRAGRLAPHEF 748

Query: 710 -----DVP---RRLLAADNARALTDVLHLSELLQQASVH-LDGEHALIRYLAEQCQADNP 760
                D P   RRLL         D   + E L     H   G  AL  +L+        
Sbjct: 749 YAHVLDGPLNGRRLLLGRLGPEAED--PIDEFLALTLAHERVGPPALQGFLSWL----EK 802

Query: 761 GGDTLKLRLESDA-DLVKVVTVHKSKGLEYPLVFLPFACAFRAVNQRDVPLKYHDD---D 816
           G   +K  L+  A D V+++TVH SKGL+ P+VFLP   A    N  D+ L   D    D
Sbjct: 803 GTVEIKRDLDQGALDAVRIMTVHGSKGLQAPVVFLPDTLAKPTGN--DLLLWTADKGVAD 860

Query: 817 GQP-----RLELTASDEA-VQRADHERLGEDLRKFYVALTRARYALWL 858
             P     + +  A+ EA +     ER  E  R  YVA+TRA   L++
Sbjct: 861 ALPFWCPSKADRGAAIEAMIDALKVERDREYRRLLYVAMTRAADRLYI 908